Gene Ssed_0795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_0795 
SymbolmutL 
ID5611379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp943453 
End bp945327 
Gene Length1875 bp 
Protein Length624 aa 
Translation table11 
GC content47% 
IMG OID640931643 
ProductDNA mismatch repair protein 
Protein accessionYP_001472534 
Protein GI157373934 
COG category[L] Replication, recombination and repair 
COG ID[COG0323] DNA mismatch repair enzyme (predicted ATPase) 
TIGRFAM ID[TIGR00585] DNA mismatch repair protein MutL 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.741444 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00456525 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAATAC AGATATTACC GCCGCAACTG GCAAACCAAA TAGCGGCGGG GGAAGTTGTC 
GAAAGACCCG CCTCTGTGAT TAAAGAGCTG GTTGAAAATA GTCTGGATGC AGGTGCAACT
CGCGTCGATA TAGAGATCGA GAAAGGCGGC AGTAAGCTGA TTAAAATTCA TGACAATGGT
TCTGGGATCT CAAAAGAAGA TCTAGGCCTT GCCCTGTCTA GACATGCCAC CTCAAAACTC
AGCTCTCTCG ATGATCTTGA CGCTATCCTC AGTTTCGGAT TTCGTGGTGA GGCGTTAGCG
AGTATCAGCT CCGTTTCCCG GTTAACCTTA ACTTCCCGAA CGGCCGACCA GGTTGAAGCT
TGGCAAGCTT ATGCCGAAGG CTCTGATATG GCGGTGAAAG TGATACCTGC CGCCCATCCG
GTTGGATCGA CCGTTGAAGC CGTCGATCTG TTTTTCAATA CGCCCGCGAG AAGACGATTT
CTTAAGAGTG ATAAAACCGA ATTCACGCAT ATCGATGAGT GGCTAAAACG TATTGCCTTG
GTGCGTAGCG ATATTCACTT TACCTTGAAG CACAATGGCA AGGTGGTACG AAACTACCGG
GCAACGAACA CCCAAGATCA ATATCTGCAA CGTTTAGCCC AGATCAGTGG GAAGAAGTTT
GCTGAACAAG CGATTGAGAT CAACTGTCAA CACGATGATC TTAAGTTAAC AGGCTATGTT
CAGTCTCCTT TTTTTGAAAC GCCGGCGAGC GATACTCAAT ATTTTTATGT CAATGGCAGG
TTGGTACGGG ACAGGCTGGT TAATCACGCC GTCAGGCAAG CATTTGCCGA GCATGAAACC
GGAGAGCAAG CAAGCTATGT ATTAATGCTT GAGCTCGATC CACATCAGGT GGATGTTAAC
GTTCACCCGG CTAAACATGA AGTCAGGTTT CATCAGAGTC GTTACGTACA TGACTATATT
TTTCAGGCCC TACAGTCGGC TCTTCATCAA GTCGGTAGGT TAGCAATCGA CTCTGATAAT
AAGCTCGATA CCGATTCTCA TTCTCAGAGT CATGAGAGAG GGCATAGCGC TTATGGCGTT
GCTGAGCCTA GCCACTCACG ACATGATTAT TCACATCAGA CTGCACCAAG CACCAAAGCA
AGCACAGAAA CAAACCGTGA GCGCTTTTCT TCACCTATTT CGGCTGTGCC TTCTCACACC
AGTGATGTGC AGAGCAGAGG AGGTGCGACT TCATCTTATC GACAGCAAGC TGAATTGCCC
AGTGCCGCTG CGATAGCATC CTATGCAGAG TTATTAAAGA CACCGGATGT AGATCAAGGG
AATAGAGGGA ATAAGGAGCT TCAAGCAAAT GTGTCAATGC CGCCAATCTT GGCGGGTCAG
TATTGGGTCC TGACTCAGGA AGAGCAACTG CTGCTCCTGC CTGTTAGAAT CATTTCGACC
TGGCTTTTGC AACACGAGAT CTCAAATAAA CTCGATAGTG GTCTGGTTAG CCAGCCATTA
TTGATGCCGG TTTCTATCTC TATGGACGAG ACTTGGAGCG ATACGCTGGC CGAGAGGGAA
TTATTGCTCA GAAAAATAGG AATTGAAGTA ACAATTCGAC TGGGGCAGTT GATTATAAAG
AAAGTGCCCC CATATTTAAG ACAGAGCCAA TTAGTAGCTG TCATACCTGA TTTACTACAG
TGGCTCAGGT TCGAAGAACC GAGTAATGAA GCATTGGCCT CCTGGCTTGC AAAGCATGAC
GATAAGCGAT TTGAGTCTGC ACCAGATACC TGGTTAGCGT TTAGTCAGTT AGATGACAAT
GTTCAAGATG AACTAATTAA GAAGGCCAAG GTTTTACCTT GGCAATCATG GCTGGAAGAA
TACCCGAGTG ACTGA
 
Protein sequence
MTIQILPPQL ANQIAAGEVV ERPASVIKEL VENSLDAGAT RVDIEIEKGG SKLIKIHDNG 
SGISKEDLGL ALSRHATSKL SSLDDLDAIL SFGFRGEALA SISSVSRLTL TSRTADQVEA
WQAYAEGSDM AVKVIPAAHP VGSTVEAVDL FFNTPARRRF LKSDKTEFTH IDEWLKRIAL
VRSDIHFTLK HNGKVVRNYR ATNTQDQYLQ RLAQISGKKF AEQAIEINCQ HDDLKLTGYV
QSPFFETPAS DTQYFYVNGR LVRDRLVNHA VRQAFAEHET GEQASYVLML ELDPHQVDVN
VHPAKHEVRF HQSRYVHDYI FQALQSALHQ VGRLAIDSDN KLDTDSHSQS HERGHSAYGV
AEPSHSRHDY SHQTAPSTKA STETNRERFS SPISAVPSHT SDVQSRGGAT SSYRQQAELP
SAAAIASYAE LLKTPDVDQG NRGNKELQAN VSMPPILAGQ YWVLTQEEQL LLLPVRIIST
WLLQHEISNK LDSGLVSQPL LMPVSISMDE TWSDTLAERE LLLRKIGIEV TIRLGQLIIK
KVPPYLRQSQ LVAVIPDLLQ WLRFEEPSNE ALASWLAKHD DKRFESAPDT WLAFSQLDDN
VQDELIKKAK VLPWQSWLEE YPSD