Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0793 |
Symbol | |
ID | 5611377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 941616 |
End bp | 942074 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640931641 |
Product | hypothetical protein |
Protein accession | YP_001472532 |
Protein GI | 157373932 |
COG category | [R] General function prediction only |
COG ID | [COG0802] Predicted ATPase or kinase |
TIGRFAM ID | [TIGR00150] ATPase, YjeE family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.949281 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00232347 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACATCAG TAAAAGTCTA CCTCGATAAT GAACAAGATA CGGTGGATCT TGGTAAGCGA CTAGCGGCAA TTATTTCTCC ACCTCTGATG CTGAATTTGT CTGGCGAATT GGGTGCGGGT AAGACAACCT TGAGTCGCGG TCTCATTCAA GCCTTAGGGC ATAAAGGGGC TGTGAAGAGT CCAACCTACG CATTAGTCGA ACCCTATGAG TTTGATGGTA TTGATCTCTA TCACTTTGAC CTTTACCGAT TGAGCGATCC TGAAGAGCTT GAATTTATGG GGATCAGAGA TTACTTTACT GAAAAAAGTG TCTGTATTGT CGAATGGCCG GATAGAGGCC ATGGTCTATT GCCTGAGGCC GATATCAGCC TGCAAATTAA CTATGTCGGT GAACGTAGAG AAGTTGAAAT TTCATCTGGT TCATATAGGG GACAGCAACT CTTGAGTAAA CTCAAATAA
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Protein sequence | MTSVKVYLDN EQDTVDLGKR LAAIISPPLM LNLSGELGAG KTTLSRGLIQ ALGHKGAVKS PTYALVEPYE FDGIDLYHFD LYRLSDPEEL EFMGIRDYFT EKSVCIVEWP DRGHGLLPEA DISLQINYVG ERREVEISSG SYRGQQLLSK LK
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