| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0783 |
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| Symbol | |
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| ID | 5609891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 928604 |
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| End bp | 929530 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931627 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_001472522 |
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| Protein GI | 157373922 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000193338 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGACACA AGTTACTATT ACTGACCCAC GAAAATGATC GCTATCGAGA CCTGCTTACC
TCATGTAGTC TTCCTGAACT CATCTTACTG GATGATGATC CACAGAACAT AGTTGAAGCC
GATATCTGGC TTGCCGAGCC AACGCTTGCC GCCCCCATTC TGCCCCATGG TAGAAAGCTT
ATCTGGATGC AATCGACAAT GGCCGGCGTC GACGCACTAG TTAAACCGCG TCAGAGAAAG
GACTATCGAC TCACAAATGT GAGGGGCATC TTTGGCCCAT TGATGAGTGA GTATCTTTTT
GGCTACTTAC TGGCTCACCA GCGAGAGCAT CAGAAATATA AATCACAGCA GGTTGAAAAA
ATCTGGCTTC CGGGCAGCTT TAAGACACTT CAGGGTCAGC ACCTGCTCCT ACTTGGCACA
GGTAATATTG CCAAGCACCT TGCGCAAACT GCCAAGCATT TTGGTATGCA AGTTACCGGA
ATCAACCGTG GCGCCAAACC GACTAAGGGC TTCGATAAAG TCGATACCTT AGCACACTTG
CCCAAGTACA TTGCCCAGGC CGACATTATC GCCAGTGTCC TGCCTAGCAC TCCGGACACC
AGAGGTGCAT TAAATTGCGA AATCCTTTCG CTGATGAAGC CTGAAGCCAT TTTATTTAAT
CTGGGGCGTG GGGATGTTCT GGATCTGGAT GCGCTTTATC TGCAGTTAAC TACAAATTGT
CAGCAAAATG CAGTTTTAGA CGTGTTTAAT CAAGAACCAC TGCCCCGGGA ACATCCTATC
TGGTCATTAC CAAATGCCAT CATCACTCCC CATATTGCAG CCCCCAGTTT TCCCGAACAG
GTCGTTGAGA TATTTATCGA AAACTACCAT AAGTTACTTA AAGGGGAGCA GTTATTACAT
GAGGTAAATT TTCAACGTGG TTATTGA
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| Protein sequence | MRHKLLLLTH ENDRYRDLLT SCSLPELILL DDDPQNIVEA DIWLAEPTLA APILPHGRKL
IWMQSTMAGV DALVKPRQRK DYRLTNVRGI FGPLMSEYLF GYLLAHQREH QKYKSQQVEK
IWLPGSFKTL QGQHLLLLGT GNIAKHLAQT AKHFGMQVTG INRGAKPTKG FDKVDTLAHL
PKYIAQADII ASVLPSTPDT RGALNCEILS LMKPEAILFN LGRGDVLDLD ALYLQLTTNC
QQNAVLDVFN QEPLPREHPI WSLPNAIITP HIAAPSFPEQ VVEIFIENYH KLLKGEQLLH
EVNFQRGY
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