| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0758 |
|---|
| Symbol | |
|---|
| ID | 5611095 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sediminis HAW-EB3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009831 |
|---|
| Strand | + |
|---|
| Start bp | 902998 |
|---|
| End bp | 903303 |
|---|
| Gene Length | 306 bp |
|---|
| Protein Length | 101 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640931602 |
|---|
| Product | primosomal replication protein N |
|---|
| Protein accession | YP_001472497 |
|---|
| Protein GI | 157373897 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2965] Primosomal replication protein N |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.208555 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00000145919 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGCCACAA ACCATTTGGT GTTATCGGGA ACGATTACTC GTTCCAGAAG CTTTAAAAGC
CCGGCAGGAA TTGCACATAG TGTGATTATG TTGGAACACA AGTCTCAGTG TTTTGAAGCA
GAAATGCTTA GAAACGTATA CTGTCAGATG CAAGTGATAT TTAGTGGCGA ACGCTTTGAA
AGCGTTACAG AACAACTGAA ATCCGGTGTG GATATCGAGG TTCAGGGATT TATTGCTCTT
CAACAGAGCA GAAATGGTCA GAATCGTTTG GTATTACACG CTGAAAATGT CGAATTGAAA
ACTTAG
|
|---|
| Protein sequence | MATNHLVLSG TITRSRSFKS PAGIAHSVIM LEHKSQCFEA EMLRNVYCQM QVIFSGERFE
SVTEQLKSGV DIEVQGFIAL QQSRNGQNRL VLHAENVELK T
|
|---|
| |