| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0756 |
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| Symbol | |
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| ID | 5611021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 901588 |
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| End bp | 902337 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931600 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472495 |
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| Protein GI | 157373895 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3137] Putative salt-induced outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.216313 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000194898 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTTTAGAG CCATAGCAGT CCTATTTTTA ACTTTCCCCC TATCGGCACT GGCTTTAGTC
CCACCGGATT ATCAAGAGCC CCCGAGCGAT TTTACCGCCG AGATTGAAGC CGGTTTTCAA
CTCAATACAG GTAACACAGA ATCCAGTAGC TTTAACGGCC GAACTAAACT CGTTTACGAC
ACGGAAAAGA CGAAGCAAGA GGGGACGGTA AAAGCTTATT TTGCGGCCGA TGATGAGAAA
ACCACCTCAG AGAAGTACGA TGTTCAGCTT CAGTCGAGCT ATAAACTCAG TGGCGGGTTC
GATGGCTATG TCTTCGGTCG AGGCGACTTC ACCTTAGATC GCTACGGCAG TTACACTCAA
ATATCGACCG TATCTACCGG TTATGGTTTC GATGCTATCT CAGATCACAG CACTAAACTC
AGTCTTGAAG TCGGCCCAGG TTATCGATAT AACATGCCGA TAGAGACAGA AGCCGAACCC
GATCCCCAAG CCAATCGCGA CGTGATTCTA CGTACGGCAG TAAAATTTGA GCAGAAGCTC
CAGGAATACA CCAGCTTAAA TGCCGATCTC ACCGCCGAAG CCGGTGAAGA CAACAGCACC
CTCACCTTAG ACATGAGCTA TAAGAACACC CTGTTCCAGG ACTGGGCCTT CAAGATAGGC
GTCAACATCA AATACACAGA CGTGGTTCCC GAAGGCACCA AGCAGACTGA TACCATAACT
ACATTCAACT TACTGTACAC ATTCCAGTAG
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| Protein sequence | MFRAIAVLFL TFPLSALALV PPDYQEPPSD FTAEIEAGFQ LNTGNTESSS FNGRTKLVYD
TEKTKQEGTV KAYFAADDEK TTSEKYDVQL QSSYKLSGGF DGYVFGRGDF TLDRYGSYTQ
ISTVSTGYGF DAISDHSTKL SLEVGPGYRY NMPIETEAEP DPQANRDVIL RTAVKFEQKL
QEYTSLNADL TAEAGEDNST LTLDMSYKNT LFQDWAFKIG VNIKYTDVVP EGTKQTDTIT
TFNLLYTFQ
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