| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0753 |
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| Symbol | |
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| ID | 5611052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 897159 |
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| End bp | 897899 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640931597 |
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| Product | 23S rRNA (guanosine-2'-O-)-methyltransferase |
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| Protein accession | YP_001472492 |
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| Protein GI | 157373892 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0205206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000134961 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAAC AAGATTTCAC CTTCGGAATT CACGCCGTAG AAGCGGTACT AAAGCACAGT
CCAGAACGAG TGATCGAAAT GTGGGTGCAG GCTGGCCGCG ATGATCAAAG ATTAGCTACG
CTACTGCAGA TGGCTGCTGA ATACGGTGTT TCAGTGCAAA CATCTGCGCG AAAAGTTCTT
GATGAAAAGT CTGATAATGG ACAACACCAA GGTGTACTAG CCCGCGTAAA AGCCGTAAAG
CAGCTCAATG ATAATGATCT GTTAGCACTG GTAGAGAAGA CTGAAACCCC TTTCTTCCTA
ATCTTAGACG GTGTTACCGA TCCGCATAAT CTGGGTGCCT GTCTGCGTAA TGCCGATGCC
GCCGGAGTAC ACGGCGTTAT TGTTCCTCGT GATAACTCTG TAGGCTTAAC GCCAACAGTG
AGCAAAGTGG CATGTGGTGC GGCAGAAGTT GTGCCTCTGT TTCAGGTGAC CAATCTAGCG
CGCACCATGA AGAGCCTGCA AGATAAAGGC GTGTGGATTG TTGGCGCAGC GGGAGAAGCC
GATAGCGACC TATACAAGAC AGATCTTAAA GGTTCTCTTG CTATCGCCAT GGGCGCCGAA
GATAAAGGTC TGCGTCGTCT GACTCGTGAG AGTTGCGATT CGATTGCATC GATACCTATG
TCTGGGTCTG TCTCGAGCCT GAATGTCTCG GTTGCCAGCG GGATCTGTTT GTTTGAGGCT
GTACGCCAGA GATTAGGTTA A
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| Protein sequence | MKKQDFTFGI HAVEAVLKHS PERVIEMWVQ AGRDDQRLAT LLQMAAEYGV SVQTSARKVL
DEKSDNGQHQ GVLARVKAVK QLNDNDLLAL VEKTETPFFL ILDGVTDPHN LGACLRNADA
AGVHGVIVPR DNSVGLTPTV SKVACGAAEV VPLFQVTNLA RTMKSLQDKG VWIVGAAGEA
DSDLYKTDLK GSLAIAMGAE DKGLRRLTRE SCDSIASIPM SGSVSSLNVS VASGICLFEA
VRQRLG
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