| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0749 |
|---|
| Symbol | |
|---|
| ID | 5611187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sediminis HAW-EB3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009831 |
|---|
| Strand | + |
|---|
| Start bp | 892237 |
|---|
| End bp | 892407 |
|---|
| Gene Length | 171 bp |
|---|
| Protein Length | 56 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640931593 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001472488 |
|---|
| Protein GI | 157373888 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3242] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000984241 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0216774 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGCTC TGGGAATCGT GCTCATTATT GAGGGAATCG GGCCACTTTT ATTTCCTAAT
CGTTGGAGGG CATACTTGAA AGAAATTTCA AATCAAAATC AGCAACTTCT ACAGCGTTTG
GGTGGTGGTT TAGTCACCGC AGGTGTCGTT TTGTTGATTA TTTTTTCATA A
|
|---|
| Protein sequence | MIALGIVLII EGIGPLLFPN RWRAYLKEIS NQNQQLLQRL GGGLVTAGVV LLIIFS
|
|---|
| |