| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0747 |
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| Symbol | rplM |
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| ID | 5613249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 891234 |
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| End bp | 891665 |
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| Gene Length | 432 bp |
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| Protein Length | 143 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640931591 |
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| Product | 50S ribosomal protein L13 |
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| Protein accession | YP_001472486 |
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| Protein GI | 157373886 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0102] Ribosomal protein L13 |
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| TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000197035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0408198 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGACTA CTTTTACTGC TACACCAGAG ACAGTCACTC GCGAGTGGTT TGTTGTTGAC
GCCGAAGGTA AAACTTTAGG TCGTATCGCT ACTGAAATTG CATCACGTCT ACGTGGTAAG
CATAAGCCAG AGTATACGCC TCATGTCGAT ACCGGCGACT ACATCATCGT TATCAACGCT
GAGAAAGTTA CTGTTACTGG TAATAAAGCA AAAGGCAAAG TGTACTACTC GCATTCGGGT
TTCATCGGTG GTATTAAGCA AATCACTTTT GAAAAGCTGC AAGACCATAA GCCTGAAATG
ATTATCGAGA AAGCAGTTAA GGGTATGTTA CCTAAAGGTC CTTTAGGACG TGCCATGTTC
CGTAAACTTA AAGTTTACGC TGGTACAGAA CATAACCACG CTGCACAACA ACCTCAAGTT
CTTGATATCT AA
|
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| Protein sequence | MKTTFTATPE TVTREWFVVD AEGKTLGRIA TEIASRLRGK HKPEYTPHVD TGDYIIVINA
EKVTVTGNKA KGKVYYSHSG FIGGIKQITF EKLQDHKPEM IIEKAVKGML PKGPLGRAMF
RKLKVYAGTE HNHAAQQPQV LDI
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