| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0746 |
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| Symbol | |
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| ID | 5613248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 889873 |
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| End bp | 890979 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931590 |
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| Product | AFG1 family ATPase |
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| Protein accession | YP_001472485 |
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| Protein GI | 157373885 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1485] Predicted ATPase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000022417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0814032 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTGATC TAACTCCATG GCAACATTAC CAGCAAGATT TAAACCGAGC CGACTTCTCT
CATGACACTG CGCAGGAACA AGCCGTAAAA AGCTTGCAGC GTGTCTATGA TGAATTGCAG
CTGATGAATT CGAAGCCAGG TGTATTCGGT AAGCTATCCT CTTTACTGGG GGCCAAGCCT
CAAACGGTTC AGGGGCTCTA TCTATGGGGA GGCGTCGGGC GCGGTAAGAC ATACCTGATG
GACACCTTCT TTGATTCTCT GCCTGGTGAT AAAAAATTAC GGGCCCACTT TCACCGTTTC
ATGCATCAAA TTCATATCGA TCTCGACGGT TTGAAAGGGC AAAGGGATCC CTTATTGATC
ATTGCCAAGC AGATGTCTGA GCAATATCAG GTGATCTGTT TCGATGAGTT CTTCGTCTCC
GATATTACCG ACGCCATGTT ACTCGGCACT CTTTTTCAGG CTCTCTTCAA AGAGGGCGTC
GCTTTGGTCG CTACATCAAA TATCATTCCC GACGAGCTAT ATAGGAATGG TTTACAGAGA
GCTCGGTTCC TGCCTGCAAT AGCATTAATC AATAAGCATT GCCAGATCCT CAATGTAGAC
TCGGGAATCG ATTATCGTCT ACGGACACTC GAGCAGGCGG AGATCTATCA TTTTCCACTC
GATGCCCAGG CCGATGAGAA TCTACTCTCC TATTTCGATA AGCTGGCTCC GGAGTCTGAG
GTATCCACTA CTGATATCGA AGTGGACGGG AGAGATATTG CAATCAGGAA GCAAGCTCAG
GGAGTGTTGC TTGCTAATTT TAGGGATCTC TGTGACGGTC CCAGAAGCCA AAGAGATTAT
ATGGAGATCG CCTGCCTTTA TCACACTGTG CTGCTCAGTG GCGTTGAACA GATGGGTGAC
AAGCAAACGG GTGATGATAT TGCCCGTCGA TTTTTAGCCA TGGTGGATGA GTTTTATGAG
CGCAATGTAA AGCTGATCAT ATCGGCTGAA GTGTCGTTAG AGGCCATTTA TAGTGAGGGC
ATGCTGGATT TCGAGTTTAG GCGGTGTCGT TCCAGACTGA CTGAAATGCA ATCTCATGAT
TATCTGGCCC TAGAACATCT GCCCTGA
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| Protein sequence | MSDLTPWQHY QQDLNRADFS HDTAQEQAVK SLQRVYDELQ LMNSKPGVFG KLSSLLGAKP
QTVQGLYLWG GVGRGKTYLM DTFFDSLPGD KKLRAHFHRF MHQIHIDLDG LKGQRDPLLI
IAKQMSEQYQ VICFDEFFVS DITDAMLLGT LFQALFKEGV ALVATSNIIP DELYRNGLQR
ARFLPAIALI NKHCQILNVD SGIDYRLRTL EQAEIYHFPL DAQADENLLS YFDKLAPESE
VSTTDIEVDG RDIAIRKQAQ GVLLANFRDL CDGPRSQRDY MEIACLYHTV LLSGVEQMGD
KQTGDDIARR FLAMVDEFYE RNVKLIISAE VSLEAIYSEG MLDFEFRRCR SRLTEMQSHD
YLALEHLP
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