Gene Ssed_0745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_0745 
Symbol 
ID5613247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp889308 
End bp889682 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content45% 
IMG OID640931589 
Producthypothetical protein 
Protein accessionYP_001472484 
Protein GI157373884 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000334995 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.113804 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATGGC CATTAGTCAT TGCAACTTTT GTATTAGGCA TCGTCTTAGG CTACGTAGGC 
AGGACTATCG TCGCGCGCAA TAATGAGTCA ACCAGTAAAG ATAAGGTATT GGAGCAGACT
CGTTTAGAGT TAGGTCAACA TAAACAAGAG GTCACCGATC ATTTTGAGGG GCACTATAAG
CAGCTGGCCG AACTAACCGA GCAATTAAAC AGGGTCAACA GACAATGGAA TGAAGCAGCC
AACACCTTAG CCCCCAAAAG CAAGGCTAAG GCACTGCCAA CCTTTAGTGC AAAGGAGACT
GTGGATACGC GATCTAGTCA GACTCATGAG CAACTCGATA CCGACAACGT CATCATCGTA
AACCAAAATA ATTAA
 
Protein sequence
MEWPLVIATF VLGIVLGYVG RTIVARNNES TSKDKVLEQT RLELGQHKQE VTDHFEGHYK 
QLAELTEQLN RVNRQWNEAA NTLAPKSKAK ALPTFSAKET VDTRSSQTHE QLDTDNVIIV
NQNN