Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0745 |
Symbol | |
ID | 5613247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 889308 |
End bp | 889682 |
Gene Length | 375 bp |
Protein Length | 124 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640931589 |
Product | hypothetical protein |
Protein accession | YP_001472484 |
Protein GI | 157373884 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000334995 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.113804 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATGGC CATTAGTCAT TGCAACTTTT GTATTAGGCA TCGTCTTAGG CTACGTAGGC AGGACTATCG TCGCGCGCAA TAATGAGTCA ACCAGTAAAG ATAAGGTATT GGAGCAGACT CGTTTAGAGT TAGGTCAACA TAAACAAGAG GTCACCGATC ATTTTGAGGG GCACTATAAG CAGCTGGCCG AACTAACCGA GCAATTAAAC AGGGTCAACA GACAATGGAA TGAAGCAGCC AACACCTTAG CCCCCAAAAG CAAGGCTAAG GCACTGCCAA CCTTTAGTGC AAAGGAGACT GTGGATACGC GATCTAGTCA GACTCATGAG CAACTCGATA CCGACAACGT CATCATCGTA AACCAAAATA ATTAA
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Protein sequence | MEWPLVIATF VLGIVLGYVG RTIVARNNES TSKDKVLEQT RLELGQHKQE VTDHFEGHYK QLAELTEQLN RVNRQWNEAA NTLAPKSKAK ALPTFSAKET VDTRSSQTHE QLDTDNVIIV NQNN
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