| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0744 |
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| Symbol | |
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| ID | 5613246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 887802 |
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| End bp | 889154 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640931588 |
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| Product | 2-alkenal reductase |
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| Protein accession | YP_001472483 |
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| Protein GI | 157373883 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00191674 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.314377 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAA AATTAAGCTT ACTTTCTGCA GCTATCCTGA CAGCCTCGCT TACTATGATG
CCAGCAATAT CCCAAGCTGC GATTCCGATG GCCGTTGACG GACAGAGTGT CCCCAGCCTT
GCACCTATGC TAGAGCGCAC AACACCTGCC GTTGTCGCCG TTGCAGTATC GGGAACACAT
GTTTCTAAGA AAAAAATCCC CGACGCCTTC CGCTACTTCT TTGGTCCTAA CGCGCCTCAA
GAACAAGTTC AAGAGCGGCC TTTCCGTGGA TTAGGTTCGG GCGTCATTAT TGATGCGAAT
AAAGGGTATA TCGTCACCAA CAATCATGTA ATCGACGGTG CCGATGAGAT CCTTATCGGA
CTTCATGACG GACGTGAAGT CGAAGCAAAA CTTATCGGCA CAGATGCTGA GTCGGATATT
GCTTTACTAC AGATAAAGGC TAAAAATCTG GTTGCAGTAA AACGCGCAGA CTCAGATGAA
CTTAGAGTCG GCGATTTTGC AGTCGCTATC GGTAACCCAT TTGGTCTGGG ACAGACAGTC
ACTTCAGGCA TTGTGAGTGC AATGGGACGC TCGGGCCTGG GTATAGAGAT GCTTGAAAAC
TTCATTCAAA CCGATGCCGC AATCAACAGC GGTAACTCGG GTGGTGCACT GGTTAATCTC
AACGGGGATC TTATCGGGAT CAATACCGCT ATCGTGGCTC CAGGAGGCGG CAATGTTGGA
ATTGGGTTTG CTATACCTGC CAATATGGTC AACAACTTAG TCGATCAAAT TATCGAACAC
GGGGAAGTCC GTCGTGGTGT ACTCGGCGTT TCCGGCAGAG ACCTGACCAG TGAACTCGCT
CAAGGCTTTG GTCTGGATAC CCAACATGGC GGCTTTGTCG ATCAGGTTAT GACAGATAGT
GCCGCCGATA AGGCTGGCAT CAAGGCCGGT GATATCATCA CCAGTGTCAA TGGTCGTAAG
ATTAAGAGCT TCCAGGAACT GAGGGCTAAA GTCGCCACTA TGGGGGCTGG TGCAAAAGTA
GAGTTTGGCC TGATTCGAGA CGGAGATGAA GAAAGCGTTA CCGCAGTCCT AGGTGAAGCG
AGCAAGACGA TTGAAGCTGC GGCTGGTGCC GTTCACCCAA TGCTTGCCGG GGCGACACTG
GAAAATAGCG ATGATGGTGT TGAGATCACT GATATTGCAC AAAACTCGCC TGCTGCGGCC
AGTGGATTGC AAAAAGGAGA TGTCATTGTT GGAGTTAATC GCTCTTCGAT TGACGATCTG
AAATCACTTA AGGCAACACT TAAAGATCAG CAAGGCGCCG TTGCACTTAA GATCAAGCGT
GGAAAAAGTA GCCTATACCT TGTATTAAGG TAA
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| Protein sequence | MKTKLSLLSA AILTASLTMM PAISQAAIPM AVDGQSVPSL APMLERTTPA VVAVAVSGTH
VSKKKIPDAF RYFFGPNAPQ EQVQERPFRG LGSGVIIDAN KGYIVTNNHV IDGADEILIG
LHDGREVEAK LIGTDAESDI ALLQIKAKNL VAVKRADSDE LRVGDFAVAI GNPFGLGQTV
TSGIVSAMGR SGLGIEMLEN FIQTDAAINS GNSGGALVNL NGDLIGINTA IVAPGGGNVG
IGFAIPANMV NNLVDQIIEH GEVRRGVLGV SGRDLTSELA QGFGLDTQHG GFVDQVMTDS
AADKAGIKAG DIITSVNGRK IKSFQELRAK VATMGAGAKV EFGLIRDGDE ESVTAVLGEA
SKTIEAAAGA VHPMLAGATL ENSDDGVEIT DIAQNSPAAA SGLQKGDVIV GVNRSSIDDL
KSLKATLKDQ QGAVALKIKR GKSSLYLVLR
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