| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0741 |
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| Symbol | |
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| ID | 5611006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 883418 |
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| End bp | 884050 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640931585 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_001472480 |
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| Protein GI | 157373880 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.289134 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGCGAG TGTTAATTGC GGAGGATGAT GAGGATCTTC GCACAAATAT GGTTGATATT
CTCGAGCTTG AAGGTTTCGA TGTGATTGCC GTTCCCAGTG CTGAAGAAGC CATTTTAGCC
TGTCAAACCC ACTCTTTCGA TATCGCTTTA ATGGATCTGG TGATGTCGGG AATGACTGGT
GTTGAAGCTA TTTCGAATCT GAGGCAAGAA AACCCCTTTA TGGCAGTGGT GATTGTCACT
GCCTACGCCA CTGTAGACAC TGCAGTTGAT GCGATGAAGA AGGGGGCTGA TAGTGTACTG
ACTAAGCCTT TTAAGAGTGT CGATCTCGTT ATGACCATAC GGCGAAGTAT TGCCGAAAAG
CAGTTACTGA AATCCAGTTC AGATATCGAC TCAGATAGCG TCTATGCCGC ATTGGCTAAC
CCGCTGCGAC GTGAAACATT AAAGTCACTT GGTTGCCATA AAGAGTTGAA ATTTATGGAC
CTGTGCCGTT TGGTTGGAGT AGAAGACCAT ACAAAGTTTA ATTTTCATCT GCGTCAGCTT
AAGAAAGCCG GGCTCGTTAT GCAAAACGAG AGGAAGATCT ATATTTTGAC AAATACAGGT
CAATTTGTTT TACAACACCA TAACTTATCT TGA
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| Protein sequence | MTRVLIAEDD EDLRTNMVDI LELEGFDVIA VPSAEEAILA CQTHSFDIAL MDLVMSGMTG
VEAISNLRQE NPFMAVVIVT AYATVDTAVD AMKKGADSVL TKPFKSVDLV MTIRRSIAEK
QLLKSSSDID SDSVYAALAN PLRRETLKSL GCHKELKFMD LCRLVGVEDH TKFNFHLRQL
KKAGLVMQNE RKIYILTNTG QFVLQHHNLS
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