Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0738 |
Symbol | |
ID | 5611684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 880051 |
End bp | 880341 |
Gene Length | 291 bp |
Protein Length | 96 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640931582 |
Product | BolA family protein |
Protein accession | YP_001472477 |
Protein GI | 157373877 |
COG category | [K] Transcription |
COG ID | [COG5007] Predicted transcriptional regulator, BolA superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.294859 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTCCA ACGAAACAGA ACAAGTTAAC GAAGAAACAG CGAAACTGAA AGAGCTAGAG CAGTTGTTAT TGGATGCTCT TTCATTAGAT GAAGTTCATG TGACCCAAGC TGGTACTCAC TATAAAATCG TTGCCGTCGG TGAATGTTTC GATGGAATGG GGCGAGTGAA GCAGCAGCAA ACAATTTATG GGCCGTTAAT GGATCGTATC ACCAGTGGTG AACTACATGC GCTAACAATC AATGCTTTCA CGCCAACACA ATGGAAGCGT GAAAAAGTAT TTAACATGTA A
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Protein sequence | MDSNETEQVN EETAKLKELE QLLLDALSLD EVHVTQAGTH YKIVAVGECF DGMGRVKQQQ TIYGPLMDRI TSGELHALTI NAFTPTQWKR EKVFNM
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