Gene Ssed_0738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_0738 
Symbol 
ID5611684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp880051 
End bp880341 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content42% 
IMG OID640931582 
ProductBolA family protein 
Protein accessionYP_001472477 
Protein GI157373877 
COG category[K] Transcription 
COG ID[COG5007] Predicted transcriptional regulator, BolA superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.294859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCCA ACGAAACAGA ACAAGTTAAC GAAGAAACAG CGAAACTGAA AGAGCTAGAG 
CAGTTGTTAT TGGATGCTCT TTCATTAGAT GAAGTTCATG TGACCCAAGC TGGTACTCAC
TATAAAATCG TTGCCGTCGG TGAATGTTTC GATGGAATGG GGCGAGTGAA GCAGCAGCAA
ACAATTTATG GGCCGTTAAT GGATCGTATC ACCAGTGGTG AACTACATGC GCTAACAATC
AATGCTTTCA CGCCAACACA ATGGAAGCGT GAAAAAGTAT TTAACATGTA A
 
Protein sequence
MDSNETEQVN EETAKLKELE QLLLDALSLD EVHVTQAGTH YKIVAVGECF DGMGRVKQQQ 
TIYGPLMDRI TSGELHALTI NAFTPTQWKR EKVFNM