| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0736 |
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| Symbol | |
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| ID | 5611001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 879081 |
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| End bp | 879743 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640931580 |
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| Product | toluene tolerance family protein |
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| Protein accession | YP_001472475 |
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| Protein GI | 157373875 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2854] ABC-type transport system involved in resistance to organic solvents, auxiliary component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.314377 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATGT ATAATCACAT TAATAAGTTA GTGGCTTCAC TTCTACTGGT GGTTTTCAGT
GCTTCGGCTC ATTATGAAGA CTCGGAAGTG AACACCATGG ATCCCTATGA TATGGTGGAA
GCGGTTGCAA ATAGGACTTT TGACAGATTT CATCATGATA TTGACATAAT TAAGACCAAT
CCTGACCACC TTAAGGTGAT AGTCTCGGAT GAGTTGATGC CTTATATCGA TTATAAATAT
GCTTCCTATA AGGTCATGGG GACTTATTTA AAGAAGACAA CCAAAGATCA GAGGGAACGC
TTCGTTACCG CCTTTCAGGG CTATTTAATC TCAACCTATG CGCAAGCGTT CACCGAGTAC
ACGGATCAAA AGGTAAAATT TGCCCCTCCG GCAGATTTTA CCCATGAAAA GATGGTGAAT
GTGAATGTAC AGATAGTCGA GCCTGGCCGC CCTCCGATTA AACTGCAGTT CAGAGTTCGT
CGTTTGAAAG ATGATAGTTG GAAGGCGTTT GATCTTGTGG CTGAAGGCGT AAGCCTGCTT
GCATCGAAAA GCTCAGAGAT CTCGAATCTC ATTCGTCAAA AGGGGATCGA CACAGTGATC
CTTGACCTGG AGCAACGCAC TCAGGGACAT ATTATTCGTG ACCCTAAGGG GAAAAAGGTT
TAA
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| Protein sequence | MRMYNHINKL VASLLLVVFS ASAHYEDSEV NTMDPYDMVE AVANRTFDRF HHDIDIIKTN
PDHLKVIVSD ELMPYIDYKY ASYKVMGTYL KKTTKDQRER FVTAFQGYLI STYAQAFTEY
TDQKVKFAPP ADFTHEKMVN VNVQIVEPGR PPIKLQFRVR RLKDDSWKAF DLVAEGVSLL
ASKSSEISNL IRQKGIDTVI LDLEQRTQGH IIRDPKGKKV
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