| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0735 |
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| Symbol | |
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| ID | 5611000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 878607 |
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| End bp | 879077 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640931579 |
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| Product | virulence factor MCE-like protein |
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| Protein accession | YP_001472474 |
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| Protein GI | 157373874 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.310055 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAACTC GAAAAATTGA AGTTTTAGTG GGGCTATTTC TATTGTCAGG ATTTGCCGCA
TTTTTAGTCT TGGTATTTAA TGTGGCTAAT ATTGAAGTAA AGACGGGAGA TAGTAGCTAT
ACCCTCTATG CTAAGTTCAG TAATATTGGC GGCTTAAAAG TTCGTTCGCC GGTTAAAGTC
GGCGGTGTGG TTGTGGGGCG AGTGAGTGCG ATTAAACTTG ATTCGTCTGA ATTAGTGCCC
ATTGTCGAGC TGTCGATGGA TAAAGAGTTT AATCAGTTTC CTGAGACAAG TAGTTTATCT
ATTTTGACCT CTGGATTACT CGGTGAGCAG TTTTTAGGCC TGACTCCAGG GTTTGAGGAT
GAGGATATTG CCATGTTAGT CGATGGCGAT CGTATCGATG ATACTCATTC CGCACTCGTG
CTGGAAGATC TGATCGGTCA GTTCCTGTAT AGCACCTCTT CAAAGGATTA A
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| Protein sequence | MLTRKIEVLV GLFLLSGFAA FLVLVFNVAN IEVKTGDSSY TLYAKFSNIG GLKVRSPVKV
GGVVVGRVSA IKLDSSELVP IVELSMDKEF NQFPETSSLS ILTSGLLGEQ FLGLTPGFED
EDIAMLVDGD RIDDTHSALV LEDLIGQFLY STSSKD
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