| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0730 |
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| Symbol | |
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| ID | 5611673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 874007 |
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| End bp | 874558 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931574 |
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| Product | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase |
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| Protein accession | YP_001472469 |
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| Protein GI | 157373869 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1778] Low specificity phosphatase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.303991 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCACATC AAGGTTTTTA CGGTCCCATA AGTGAAGATG TTTGGCAAAA AGCAAAAAAT
ATCAAGTTAC TCATCTGTGA TGTTGATGGT GTCTTCTCCG ATGGCCTGGT TTATATGAGT
AACAGCGGTG AAGAGCTGAA AACCTTTCAT ACCAGAGACG GCTATGGAGT CAGGTCTCTG
CTGACCAGTG ATATTCCTGT CGCTATCATC ACAGGGCGTA AATCTCAGAT AGTCGAAGAC
CGTATGACGG CGCTTGGGAT CACCCATATC TACCAAGGCG TAGACGACAA GATGGTGCCA
TATCAGGACC TGCTCACTCT CTATAATGTC AGCCCGCAGC AGGTCGCCTA TATTGGTGAT
GACATGGTCG ATCTTCCGGT GATGAAGCAG GTGGGATTAT CTGTGTGCGT CGCCGACGGA
CACCCTTATG TTAAACAACA TGTCGACTTC ACCACGCATA TTCGTGGTGG CCACGGTGCA
TTGCGTGAAT TGACGGATCT TTTGTTACTC AGCCAGGATA AGTTCGATAC CGCTCATGGA
ATGAGTATAT GA
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| Protein sequence | MSHQGFYGPI SEDVWQKAKN IKLLICDVDG VFSDGLVYMS NSGEELKTFH TRDGYGVRSL
LTSDIPVAII TGRKSQIVED RMTALGITHI YQGVDDKMVP YQDLLTLYNV SPQQVAYIGD
DMVDLPVMKQ VGLSVCVADG HPYVKQHVDF TTHIRGGHGA LRELTDLLLL SQDKFDTAHG
MSI
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