| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0727 |
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| Symbol | |
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| ID | 5611771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 872085 |
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| End bp | 872816 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931571 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001472466 |
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| Protein GI | 157373866 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.12728 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGAGA TGACGCTAAA GGCCGTTAAC CTCGCCAAGA GCTATAAGAG TCGTGCCGTA
GTACAAGATG TGAGTCTCAC AGTAAAAACA GGGCAAATTG TCGGCCTGTT AGGCCCAAAT
GGTGCGGGAA AAACCACCAC ATTTTATATG GTGGTCGGCT TAGTGCAGAG CGATAAGGGA
CGCATCTTTA TCGACGAGGA TGACCTGACC TTAGATCCCA TGCATCTACG CGCCAGAAAA
GGGATAGGTT ATCTGCCTCA AGAAGCCAGT ATTTTCCGTA AACTGTCCGT CAGAGATAAC
ATCATGGCGG TATTACAGAC CCGCTCTGAG ATGAGTAACA ATGAACGCGA AGAGCAGCTC
GAACACCTGT TAGAAGAGTT CCATATTACT CATATCAGAG ACAGTCTCGG TATGGCCTTG
TCTGGTGGTG AACGTCGACG AGTCGAAATT GCACGAGCTT TGGCGGCGAA TCCAAAATTT
ATCTTGCTCG ATGAACCTTT TGCCGGCGTC GATCCGATTT CCGTTATCGA CATCAAGAAA
ATCATCTTAC AGCTCAAGAG TCGAGGCCTT GGCGTGCTAA TAACAGACCA TAACGTTCGT
GAAACACTGG ACGTTTGTGA ACACGCCTAC ATCGTGAGTC ACGGAAACTT AATAGCAGAA
GGCACCCCTG CCGAAATCTT GGACAATCAG CAGGTACGGG CTGTGTACTT AGGTGAACAA
TTCAAGCTAT AG
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| Protein sequence | MSEMTLKAVN LAKSYKSRAV VQDVSLTVKT GQIVGLLGPN GAGKTTTFYM VVGLVQSDKG
RIFIDEDDLT LDPMHLRARK GIGYLPQEAS IFRKLSVRDN IMAVLQTRSE MSNNEREEQL
EHLLEEFHIT HIRDSLGMAL SGGERRRVEI ARALAANPKF ILLDEPFAGV DPISVIDIKK
IILQLKSRGL GVLITDHNVR ETLDVCEHAY IVSHGNLIAE GTPAEILDNQ QVRAVYLGEQ
FKL
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