| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0725 |
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| Symbol | |
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| ID | 5611801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 870097 |
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| End bp | 870384 |
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| Gene Length | 288 bp |
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| Protein Length | 95 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640931569 |
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| Product | sigma 54 modulation protein/ribosomal protein S30EA |
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| Protein accession | YP_001472464 |
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| Protein GI | 157373864 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.827717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.121838 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAATAA ACCTAACAGG GCACCACATT GAAATTACAA CATCACTACG TCAATACGTT
GAAGAAAAGT TTACTAAACT TGAACGGCAT TTCGATCAGA TCAATAATGT GCACGTTATT
TTAAATGTTC AGAAAATGCA GCAAAAGGCG GAAGCAAAAC TCCACCTTTC CGGTGGTGAG
GTTTTTGCTA CGTCTGAAAA TGCGGACATG TATGCCGCAA TTGACTCCCT GATTGATAAG
CTAGACCGTC AGGTTATTAA ACACAAAGAG AAGCTAACAA AACATTAA
|
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| Protein sequence | MQINLTGHHI EITTSLRQYV EEKFTKLERH FDQINNVHVI LNVQKMQQKA EAKLHLSGGE
VFATSENADM YAAIDSLIDK LDRQVIKHKE KLTKH
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