| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0714 |
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| Symbol | |
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| ID | 5612000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 860641 |
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| End bp | 862035 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640931558 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472453 |
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| Protein GI | 157373853 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0157083 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAACA GATTGAAGTC CCTGTCCCTG GCTCACTATT CACTGGGTGT TTTGGTCACT
GTCTTGTGTG TACGCCTGGT GACTCTTGCC TTGTATCCTC TGATGGATAC CACCGAGGCG
AGGTACGGCG AGATGGCCCG GTTGATGGTA GAGACAGGTA ACTGGCTGAC GCCGTTGTTC
GATTACGGTG TTCCCTTTTG GGGCAAGCCA CCGCTGCATA CCTGGATGAG TGCTTTGGGT
ATCGAGCTGT TCGGTATATC GGAGTTTGCG GTACGTTTCC CCCATTGGTT GGCGGCAGTC
GCGGTATTAA TCTTGACCGG CTACCTTGCT AAACAGGTTA AGGTTTCGGC ACTGCAAGTC
GCCATTTTGC TCACGACGAC CAGCGTATTT TATGTCAGCG CTGGCGCTGT TATGACCGAT
ATGGCGCTCA CACTGGGGAT GACCCTGGCT ATGGTTGGCT TCTATCTATG CTGGCAGGAC
AGGCAGGTAT GGGGCTATTT GGGCTTTGTG GGTTTAGCCA TCGGCCTGCT GTCAAAGGGA
CCGGTTGTGT TGGTCTTGAT GAGCTTGGCC GTGGGACTCT GGTTACTATG GCAATATGGT
CCGATTCAGC CGTGGAAACA ACTCTATAGG AGAGTGCCAC TTCTCGGTGG ACTTGGCCTG
ATGTTACTCC TTAGCTTGCC CTGGTATTTA ATGGCGGAGC AGGCGACCCC GGGATTCCTG
CAGTATTTTA TTGTTGGAGA GCATTGGCTG AGGTTTGTCG ATAGTGGCTG GCAGGGCGAT
CTTTATGGTT CGGCTCATGA TGAAACCCGA GGCACTATCT GGTTATTCTT TGCCGTATCG
GCCCTGCCCT GGTCTCTGTT TATCCCCAGA GCACTTTGGC GTTTATGGCA AGCCGGAAGT
GGCTTCGATA AGACGACTAA GTTCTTTATC TGCTGGATGT TATCGCCACT TATCTTGTTT
ACGTTCGCTG GAAATATTCT GCCCGCCTAT GTATTGCCAG GGATCCCTGG TATGGGGTTG
CTCTTAGCCT ACGCCTGGCG TGGTGAGAAG ATACCTAAGC TTGAGCCCAT TGCGCTTGGG
GTCTCCCTGT TAATACTCAT GGCCGTTGTC GTGCTCAACC TGGGGCCGAC AAAGGAGAAG
AGTGATAAGT GGCTGCTCGC TCAAAGAGCG CCGGCTATCT CGACCTATTA TTGGCAAGAC
AGACGTTTCT CATCGAAATT CTACAGTCAG GGAAAAGCTA AGCTGTTGCA GAGTGAGGCC
GAGTTACGCC AAGTAGCAGG GGTCCCCTTC TATTTAGTTG TGAAAAATGA AAATCTGGAC
GATCTGAAGA CTTTTTCCGA ATGTTTTAAT ACCGCTGAAA CAGCTAAAAA GAGTTTACTT
CTATGCGGCA CATAG
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| Protein sequence | MINRLKSLSL AHYSLGVLVT VLCVRLVTLA LYPLMDTTEA RYGEMARLMV ETGNWLTPLF
DYGVPFWGKP PLHTWMSALG IELFGISEFA VRFPHWLAAV AVLILTGYLA KQVKVSALQV
AILLTTTSVF YVSAGAVMTD MALTLGMTLA MVGFYLCWQD RQVWGYLGFV GLAIGLLSKG
PVVLVLMSLA VGLWLLWQYG PIQPWKQLYR RVPLLGGLGL MLLLSLPWYL MAEQATPGFL
QYFIVGEHWL RFVDSGWQGD LYGSAHDETR GTIWLFFAVS ALPWSLFIPR ALWRLWQAGS
GFDKTTKFFI CWMLSPLILF TFAGNILPAY VLPGIPGMGL LLAYAWRGEK IPKLEPIALG
VSLLILMAVV VLNLGPTKEK SDKWLLAQRA PAISTYYWQD RRFSSKFYSQ GKAKLLQSEA
ELRQVAGVPF YLVVKNENLD DLKTFSECFN TAETAKKSLL LCGT
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