| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0708 |
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| Symbol | |
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| ID | 5612073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 854106 |
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| End bp | 855473 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931552 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472447 |
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| Protein GI | 157373847 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000336501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000114896 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | TTGAAAAAAT CTTTTTTATG GCAGGCACTC ATCTTATCCG GTGCATTGCT GGGCGTGACT
GCTTGCAGCA GTGATGATGA GGATAGCTCC TCCGACATGA GTTATATTCA ATTTTACAAT
GCGTCACCCA ACAGCACCTC GGCGCGGCTA TCGATGGATG AATACGAATA TACAGGTGTG
GATTTTGCCG ATTCTATGGC CAGATACTCA TACTCGACGG GGAGTGTGGA GTTGGCCGTT
ATCGGTAATG ATGAGTTAGG TGACGATCAG ACCATATATG AGCAGAGTCT GGATCTGGGT
AATGATGAGG AGCATCTGTT TATGCTCATT GGTGATTACC ATTCACCCGA ATTTATCGAT
ATTAACTATC AAAGAGAGGA GATGGATGAG CTAAACAGCG ATGAAGATGA AGACTATAGC
AAGATGCAGG TTCTGGTGGC CCATACGGCG ATGAACAGCG CCGGGTTTGA TGTCTATATT
GGTCTCTATG GTCGTGAATT TATTGATGCG ACTCTGATTA GTGAGGTGAG CTACAGGGAG
CACTCCGATG CGGTGATATT TGATACGGGT GATTATATCC TTTATCTGAC TGAGCCGGAC
TCTATGGAGC CGATATACAC CACTGCGAGC ATGTCGCTAT CGACTAAAAC TGTTTACAAG
TTGATTATTC GGGAAAGCTT CGGACCCGGC ACGCCAAACA TCACTATTGA TAGTGTCGAC
TCAACCTCCA CTCCTGTGAC CTATGCCAAT GTTGATGCTC ATGCCGAATT TAGAGTCTTT
AACGCCCTGA ATGAGCAGGG GAGTATCGAT GTTGAGATGA CTAACCATTT AGGTGCCATC
CAGGCGGATG ATATCGAAGT AGGGAAGGTC TCCGAGTTTA AAGAGATAGA CTTTGATGAT
TACGGGGTCC AAATTCAACA GAGCGAATCG GGTGAGGTGT TAGCGAATAA CCTCTTGGTG
ACCTTTAACC AGGATGAAAG CCGATCCATC TTTGTCTACC AGGATGAGTC CGGGGGGGTG
AGAGGCATGA CTTTGACTCA TGATCTCAGG CCGAGGGCAT TTGAGTACCA GATGAACTTC
GCGAACCTGG TGCATGAGTT CGAGGATCTC ACCGTCTACT TTGTTCGTGC CAGTGAAACC
ATTGAGTCGG CAGAATATAA GATAGATAAC GCTGATTTTG CCGAATTGAA TGCGCTCACC
ATACCGTCCG GGGAGTATGA AATTAGTGTG GTCCAGCAAG ATGATAATGA TGATCTGACC
TTGCTTTACC AATCTGAGCT ACTGAGCCTG GAGGGGGGAG GTAACTACTC GATGGCGCTG
ATTAAAGATA CCTCTATGCC CTTAGGCTAT CAGCTGTCAC TGTTTTAA
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| Protein sequence | MKKSFLWQAL ILSGALLGVT ACSSDDEDSS SDMSYIQFYN ASPNSTSARL SMDEYEYTGV
DFADSMARYS YSTGSVELAV IGNDELGDDQ TIYEQSLDLG NDEEHLFMLI GDYHSPEFID
INYQREEMDE LNSDEDEDYS KMQVLVAHTA MNSAGFDVYI GLYGREFIDA TLISEVSYRE
HSDAVIFDTG DYILYLTEPD SMEPIYTTAS MSLSTKTVYK LIIRESFGPG TPNITIDSVD
STSTPVTYAN VDAHAEFRVF NALNEQGSID VEMTNHLGAI QADDIEVGKV SEFKEIDFDD
YGVQIQQSES GEVLANNLLV TFNQDESRSI FVYQDESGGV RGMTLTHDLR PRAFEYQMNF
ANLVHEFEDL TVYFVRASET IESAEYKIDN ADFAELNALT IPSGEYEISV VQQDDNDDLT
LLYQSELLSL EGGGNYSMAL IKDTSMPLGY QLSLF
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