| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0705 |
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| Symbol | |
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| ID | 5612208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 850305 |
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| End bp | 850883 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640931549 |
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| Product | lipase-like protein |
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| Protein accession | YP_001472444 |
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| Protein GI | 157373844 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.277877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000332189 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAATAG TACTGGTACA TGGGATCTTT AATACAGGCC GCGTGCTTCG ATGGATGAAG
TGTCAGTTCG AAGCACAGGG CCATGAGTGT TTTACGCCGA CACTTACCCC GTTTGATGGT
CGTCATGGCA TCGAGTACGC CAGTGCGAGT CTCAAGCGGC AGATAGAGGA GCGCTTCGGA
GAGAAGGAGC CGATTACTCT GGTTGGTTTT AGTATGGGCG GAATCGTAGG GCGCCACTAT
CTGCAGATGT TAGGCGGTGC CTGTCGAACG GTAAACTTTT TTACCCTGTC GACGCCTCAT
AGAGGCAGCT TCTGGGCTTA TCTTCCCTAT CCATCGAAAG GGATGAAACA GCTTAGGCCT
GACAGTGCAT TGCTACGCTC TCTCGATGCC GATGAGGTCA GTCTGCAGGG GGTTAAGGTG
TTCTCATATT GGACGCCGAT AGATTTCACC ATAATACCGA GCTCCAGCTC CTATTGGCGA
CTTGCCGAAA ACAAAAAGTT TTTTATCGTG CTGCACCTGT CAGTCATCTT CAGCCGCAGA
ATTGTCACCG AGATCTTAGG TAATCTCAGA TCGGAATAA
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| Protein sequence | MKIVLVHGIF NTGRVLRWMK CQFEAQGHEC FTPTLTPFDG RHGIEYASAS LKRQIEERFG
EKEPITLVGF SMGGIVGRHY LQMLGGACRT VNFFTLSTPH RGSFWAYLPY PSKGMKQLRP
DSALLRSLDA DEVSLQGVKV FSYWTPIDFT IIPSSSSYWR LAENKKFFIV LHLSVIFSRR
IVTEILGNLR SE
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