| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0700 |
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| Symbol | |
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| ID | 5612245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 843211 |
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| End bp | 843936 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931544 |
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| Product | ABC transporter related |
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| Protein accession | YP_001472439 |
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| Protein GI | 157373839 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1117] ABC-type phosphate transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.752157 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAGATA TTGCCGGAGA TCCCCGAGGT GATATCGTCG GTCACCTTGA GAACGTCAGT
ATTCAATTTG CCGATACAAA GATCCTCCGT GATGTGAACT TACAGCTACT CAAGGGCCAG
TTGCACATGC TGACCGGCCC ATCGGGTTGT GGAAAAACAA CCCTGTTGCG GGCGTTAAAC
AGGCTCAACG ATTGTTTCGA CAGGCATGAG ATGATCGGCA GTATTTGTTT GAAATTGTCC
GAAGGTGAGG TCGATGTCCA TCTGCTTGCC CATAAGCATC TGCCTCTGCT GCGCCGAAAA
GTCGGCATGG TATTTCAAAT TCCCAATCTC TTACCGGGTA GCATTTTTGA CAACCTGCTA
TTGCCACTTA AGATTGTCGC TGGGTTAGAT TCGACCCAAG CCGTGGCGCG CTGTGAGAAA
GTGCTGATAC AGGTGAAGTT ATGGGATGAG GTTAAGGATA GGCTTAATAA TGATGCTTCC
TCACTGTCCG GTGGTCAGCA ACAACGATTA TGCCTGGCCA GAGCCTTAGC TCTTGAGCCA
GAGATACTAC TGTTAGATGA ACCTACGGCT TCTTTAGATC CTGAAAATAC AAAGGTGATA
GAGGAGTTAT TGGAATCGCT GAAACAGCAA TATACCATGG TGATGGTGTC ACATTGCCCC
GCCCAGACTG AGCGGTTGGC GGATAAGATA TTCAGGTTGG ATGGACAGCA GGTTATCAGT
GGTTAG
|
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| Protein sequence | MLDIAGDPRG DIVGHLENVS IQFADTKILR DVNLQLLKGQ LHMLTGPSGC GKTTLLRALN
RLNDCFDRHE MIGSICLKLS EGEVDVHLLA HKHLPLLRRK VGMVFQIPNL LPGSIFDNLL
LPLKIVAGLD STQAVARCEK VLIQVKLWDE VKDRLNNDAS SLSGGQQQRL CLARALALEP
EILLLDEPTA SLDPENTKVI EELLESLKQQ YTMVMVSHCP AQTERLADKI FRLDGQQVIS
G
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