Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0697 |
Symbol | |
ID | 5612211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 840563 |
End bp | 841399 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640931541 |
Product | phosphate binding protein |
Protein accession | YP_001472436 |
Protein GI | 157373836 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0226] ABC-type phosphate transport system, periplasmic component |
TIGRFAM ID | [TIGR02136] phosphate binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGTTTA AAACCTGCTC TGTTCGCTTA ATGGCGATTT TTACCTTGTT CATATCGAGT CCACTTATTG CCGATGAACT CTCTGCTTTC GATAAGATGA GTGGTCAGCT AAACATCGCT GGTGGTACCG CACATATTCC GGTGATGAAG AGGGCGGCAA GACAGATCAT GGGGCATAAC CCCAACATTC GTATCACCAT CGCCGGTGGC GGTTCGGGCG TCGGTGTTCA GCAGGTGGCC AAAGGGCTGG TGGATATCGG CAATACCGGC CGTGCCTTAA AGAATAAAGA GATGAACTTA GGACTGAATT CATTCGCCTT CGCTATCGAT GGTGTCGCCG TTATCATTCA TCCACAGAAC CCGGTCGATG ATCTAAGCCA GCAGCAGATT ATCGACATTT ACCGGGGGAA AATTACTAAC TGGCGCGAGC TCGGTGGTCA AGACAGACAG ATACACCTCT TTAGTCGCGA TGAAGCGAGT GGTACCCGCT CTGTGTTCAG CAAGAAGCTG TTAAAAGGTG CGCAGCTTGC TGCAAACGCA AACATAGTAC CATCCAATGG TGCGATGAAA ACCGCAGTGT CACAAGACAT TGGGGCTATC GGTTACTCTA GCGTGGGTTA CATCGATAAC ATGGTAAAAG CGCCAACGTA TAACCATATT ATGCCCACTC AAGAGGCCTG TGCTTCAGGA GAATATCCTG TGGTGCGACG CTTATACATG AATACGAAGG GGCTACCTGA TGGTCTGACT CAGGCCTTTA TCGATTACAT CTATAGTAAG CAAGGTGCGA AGCATATCCA GGCATCGGGT TATATTGCAC TCGACGCAAA GCAATAA
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Protein sequence | MMFKTCSVRL MAIFTLFISS PLIADELSAF DKMSGQLNIA GGTAHIPVMK RAARQIMGHN PNIRITIAGG GSGVGVQQVA KGLVDIGNTG RALKNKEMNL GLNSFAFAID GVAVIIHPQN PVDDLSQQQI IDIYRGKITN WRELGGQDRQ IHLFSRDEAS GTRSVFSKKL LKGAQLAANA NIVPSNGAMK TAVSQDIGAI GYSSVGYIDN MVKAPTYNHI MPTQEACASG EYPVVRRLYM NTKGLPDGLT QAFIDYIYSK QGAKHIQASG YIALDAKQ
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