Gene Ssed_0697 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_0697 
Symbol 
ID5612211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp840563 
End bp841399 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content49% 
IMG OID640931541 
Productphosphate binding protein 
Protein accessionYP_001472436 
Protein GI157373836 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0226] ABC-type phosphate transport system, periplasmic component 
TIGRFAM ID[TIGR02136] phosphate binding protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTTTA AAACCTGCTC TGTTCGCTTA ATGGCGATTT TTACCTTGTT CATATCGAGT 
CCACTTATTG CCGATGAACT CTCTGCTTTC GATAAGATGA GTGGTCAGCT AAACATCGCT
GGTGGTACCG CACATATTCC GGTGATGAAG AGGGCGGCAA GACAGATCAT GGGGCATAAC
CCCAACATTC GTATCACCAT CGCCGGTGGC GGTTCGGGCG TCGGTGTTCA GCAGGTGGCC
AAAGGGCTGG TGGATATCGG CAATACCGGC CGTGCCTTAA AGAATAAAGA GATGAACTTA
GGACTGAATT CATTCGCCTT CGCTATCGAT GGTGTCGCCG TTATCATTCA TCCACAGAAC
CCGGTCGATG ATCTAAGCCA GCAGCAGATT ATCGACATTT ACCGGGGGAA AATTACTAAC
TGGCGCGAGC TCGGTGGTCA AGACAGACAG ATACACCTCT TTAGTCGCGA TGAAGCGAGT
GGTACCCGCT CTGTGTTCAG CAAGAAGCTG TTAAAAGGTG CGCAGCTTGC TGCAAACGCA
AACATAGTAC CATCCAATGG TGCGATGAAA ACCGCAGTGT CACAAGACAT TGGGGCTATC
GGTTACTCTA GCGTGGGTTA CATCGATAAC ATGGTAAAAG CGCCAACGTA TAACCATATT
ATGCCCACTC AAGAGGCCTG TGCTTCAGGA GAATATCCTG TGGTGCGACG CTTATACATG
AATACGAAGG GGCTACCTGA TGGTCTGACT CAGGCCTTTA TCGATTACAT CTATAGTAAG
CAAGGTGCGA AGCATATCCA GGCATCGGGT TATATTGCAC TCGACGCAAA GCAATAA
 
Protein sequence
MMFKTCSVRL MAIFTLFISS PLIADELSAF DKMSGQLNIA GGTAHIPVMK RAARQIMGHN 
PNIRITIAGG GSGVGVQQVA KGLVDIGNTG RALKNKEMNL GLNSFAFAID GVAVIIHPQN
PVDDLSQQQI IDIYRGKITN WRELGGQDRQ IHLFSRDEAS GTRSVFSKKL LKGAQLAANA
NIVPSNGAMK TAVSQDIGAI GYSSVGYIDN MVKAPTYNHI MPTQEACASG EYPVVRRLYM
NTKGLPDGLT QAFIDYIYSK QGAKHIQASG YIALDAKQ