| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0695 |
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| Symbol | |
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| ID | 5612209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 838408 |
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| End bp | 839421 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640931539 |
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| Product | ApbE-like lipoprotein |
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| Protein accession | YP_001472434 |
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| Protein GI | 157373834 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCC TGATGATGAC CTGGTTATTG TTCCTTTTGC TTATGTCTCA GGCATGGGCG
CATATCAATA TCGAGCAGAT TACCGGTAAT ACGATGGGAA CGAGCTACAC GGTACAGTTG
CGCCTGCAGG ACAGTTTGGT GACGAAACAG CAGGTAAAGG CGTTAGTGGA GCAGGAGTTG
GAGAGGGTAA ACAGCACTCT GTCGGTTTAT CGTGAGGACT CCGAAATATC CGTATTCAAC
TTAAACGATG CTGATAGTCC TATCCCTGTA TCTGAACGGC TTTGGGATGT ACTGCAGATA
TCGAAGAGCG TATCGGCGCA AACCTATGGT GCGCTCGATG TGACCTTAGG TCCCGTGATC
GAGTTCTGGG GTTTTGGTGT TAAGCCCAGA GATCTGCAAC ATAAAGACCG TGGTCAGCTG
GAGCTGGCTC GCTCGAAAAC GGGCATGGAT GGATTTACCC TGGATTCGGG AAGCGTGACC
AAAGTGATTC GAGGGCTGAA TATCAACCCT TCGGCGGTGG CGAAGGGTTA TGGAGTGGAT
CGTGTCGCCA AAGTGCTTGA TGGCGCGGGT GTACTTAATT ATCTGGTAGA GATAGGGGGA
GAGGTGCGGA CGCGCGGAGT CGGTGTCAGG GGGCGAGAGT GGAGAGTTGC CGTGACCCGA
CCGCAGAGGT TCAGCTTGGA GATACAGCAA CTTATCACTC TTAAAGGTAT GTCGATGGCG
ACCTCGGGTA GCTATGTGAA TTTTATCCAA AGCGATGACA GACAGCTGAG TCACATAATC
GATCCAGTAA CCGGAATGCC GGTCGAAAGC AATCTGGTCT CGGCGACCGT GCTTCATCGC
CAGTGCGCTG TAGCCGATGG CTATGCGACT GCCATGATGA TCTTGAATGT GGAACAGTCT
ATACAGATTG CCAATGAACT CGGATTGGCG GTCATGTTAA TTGAACAGAC CGATATGAGA
CTGAAGACCC ACTTCAGTGA CGCCATATAT CCTTTTCTGG TTAAGCTAGA CTAG
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| Protein sequence | MKLLMMTWLL FLLLMSQAWA HINIEQITGN TMGTSYTVQL RLQDSLVTKQ QVKALVEQEL
ERVNSTLSVY REDSEISVFN LNDADSPIPV SERLWDVLQI SKSVSAQTYG ALDVTLGPVI
EFWGFGVKPR DLQHKDRGQL ELARSKTGMD GFTLDSGSVT KVIRGLNINP SAVAKGYGVD
RVAKVLDGAG VLNYLVEIGG EVRTRGVGVR GREWRVAVTR PQRFSLEIQQ LITLKGMSMA
TSGSYVNFIQ SDDRQLSHII DPVTGMPVES NLVSATVLHR QCAVADGYAT AMMILNVEQS
IQIANELGLA VMLIEQTDMR LKTHFSDAIY PFLVKLD
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