| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0687 |
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| Symbol | |
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| ID | 5612441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 827789 |
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| End bp | 829000 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640931531 |
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| Product | NnrS family protein |
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| Protein accession | YP_001472426 |
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| Protein GI | 157373826 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3213] Uncharacterized protein involved in response to NO |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAATA TCGATGACCC CGCCGCAGTC GAGAAGACTC CGGCAATATG GAGATTAGGT
TTTCGTCCCT TCTTTCTCGG TGGTGCCAGC ATTGCGATGC TCTATATTCC GTTGTGGCTG
GTGACCTGGT TTCTACCGCA ATATAGCCTG TTTCAGAGTG AGTTTTGGGT CAAAGTCGTG
CCGTTATGGT GGCATCCCCA TGAGATGCTG TTCGGCTTCG CGTTAGCGAT TGTGTGTGGC
TTCCTGCTGA CCTCGGTACA AACCTGGACC AATCAACCCG GTATGAAGGG CTGGCCGCTT
GCCGTCACCT TCGGCTGCTG GTTGTCTGCC CGACTGTTAC TGCTCGCCCC CTTTGAGATC
CCCCTGTGGC TGCCGGCGCT GTTTGATTCA CTGTTCCTCG CATTCACCGC GATTAAGCTG
TGGCGCTGCA TCTATAAAGT TAAGCAGTGG CACAATATCG GCTTTCCTAT CATGCTGGCG
GTTGCGTTAG GGATTAACCT TCTTAGCTAT TACGCACTCA GCGAGCGTAA TTTCACCTTA
AGTAATCATA TATGGCAGGC AATGCTATGG TGGTTAGGCC TGCTAATTAC CATAGTCGGC
GGACGCGTGA TCCCCTTCTT TACTGCGATT AAGATTAAAC AGACTAAGCC CACGCCAATA
GCTGTCATTG AACGTTCTCT TATTGTTTTA ATGGCGCTGC TGGTGGTGCA GGCGATTACT
AAGATGATGC CTTCGGCGCT TGAGCAGGTA TTATTAATTG CCGCCGGGGC ACTTCACTTG
GCTCGTTGGT TACGCTGGTT TCCCCATAAG ACTCTGAAAG AGCCCATGTT GTGGTCTCTG
CACTCGGCCT ATATCTTCTT GCCGATAACT CTGTTCGCGC TGGCCTGGAA CGTAAACGAC
CTCAATGCCT ATCGTCACCT GTTGCATCTG TTTGCCATAG GCACACTCGC CGGGATCTGC
CTCTCTATGA TCTCCCGCGT GTCACTGGGG CATACCAGCC GCAATATCTA TGAGGGGCCT
AAGATGGCTA TCGCCTTTAT CTGCCTGCCA ATTGCGGCAA TATTCAGGGC TGTGATCCCG
CTGTTTCTAC CCGAACAGTC ACAGCTATGG TTATGGTTGG CAGGATCTTT CTGGTCGGTG
GCTTTCGGAA TGTTCGTCTG GAATTATGCG ACAATTCTAT GTAGCCCCAG AGCCGATGGA
CGCCCGGGCT GA
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| Protein sequence | MINIDDPAAV EKTPAIWRLG FRPFFLGGAS IAMLYIPLWL VTWFLPQYSL FQSEFWVKVV
PLWWHPHEML FGFALAIVCG FLLTSVQTWT NQPGMKGWPL AVTFGCWLSA RLLLLAPFEI
PLWLPALFDS LFLAFTAIKL WRCIYKVKQW HNIGFPIMLA VALGINLLSY YALSERNFTL
SNHIWQAMLW WLGLLITIVG GRVIPFFTAI KIKQTKPTPI AVIERSLIVL MALLVVQAIT
KMMPSALEQV LLIAAGALHL ARWLRWFPHK TLKEPMLWSL HSAYIFLPIT LFALAWNVND
LNAYRHLLHL FAIGTLAGIC LSMISRVSLG HTSRNIYEGP KMAIAFICLP IAAIFRAVIP
LFLPEQSQLW LWLAGSFWSV AFGMFVWNYA TILCSPRADG RPG
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