| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0685 |
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| Symbol | |
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| ID | 5612439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 825385 |
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| End bp | 826449 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931529 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472424 |
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| Protein GI | 157373824 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1289] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGTTT TTTCTCCTGC TACACCCTTT GCCAATTATA TCTATCGTCA TTTTCGGGCC
ATTCATGCCT TGAAACTGGG GTTAGCACTA CTTATTGCCG TCATTATCAA TGCTTTTTGG
GCTCAGCCTC ACTTCGTCTG GAGCATGGTG ACTATAGTGA TAATTATGAT GAGCTTGCCT
CAGGTGGGTG GTGCGATCGA AAAATCGATG CAAAGAGCCG TGGGGACATG TATTGGCTCT
GCCTATGGTG TCATGCTGGT GGTCAGTTTT CAGAATTACT GGTTACTTAT GGGCTTGTTG
ATCCTTGGGG TCAGCTTGAC CTGTTTTATC TCTGCCGGGC GATACAGCTA TGCCTATCTG
GTGGCGGGAT TTACAATGAT TATCGTGATT GGCGATGCAA ATCACGATAC CTTTGAGGCG
CTATGGCGCA CGGCCAATAT TCTGCTGGGC TGTTTTATTG CCGTGCTGGT TTCTCTGTTT
GTGTTTCCGA TAAAGGCTAA ACAGGATTGG CGCAGCCAGT TAGCTCACTC GACAAACATA
TTAGCCGTCA TACTGGATAA GCACTTTACC GCCTCAATGA AAGAGCCATT CGATGCCAGG
CCCGAGCTCG AGTCTGCAAT GAAGGCGGTA TTGACCCAGA AGAAGCTCTT CTTCTCTCTG
GAGTGGGAGA GCAAGACACT TAAACAATAT AAGTCAGTAT TAACTCATCT GGTGAACAAG
CAGATCCGGG TGATCACCCT GCTGGAGTTG CTGCTTCAGA CCCGATGGAC GGATGAAGAT
AGTGCCTCCT ATGCAAAGGT TAACCAAGTC GCATTAATAC TGCAGAGCAG CCTGTTGGAG
CTCTCTGAGT TTCTTACCGG TCGGCGCACC GATTTCCCGG CACTGCCCGA AAAAATGGCG
ATAAACCTTC ATCAAGAGCT ATTGGCATCA CTGGACAGGG ATGAGCAGCA AGAGTTTTCG
CTTACGGGAT ACAGCTGGCT TATCTATCAG TTAGCCAAAA CCATAGAGTC TATCTATGCC
GAGGTTGATG TTATCAGCCA GGCCTATGAA AGGAAGAGAC GCTAA
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| Protein sequence | MSVFSPATPF ANYIYRHFRA IHALKLGLAL LIAVIINAFW AQPHFVWSMV TIVIIMMSLP
QVGGAIEKSM QRAVGTCIGS AYGVMLVVSF QNYWLLMGLL ILGVSLTCFI SAGRYSYAYL
VAGFTMIIVI GDANHDTFEA LWRTANILLG CFIAVLVSLF VFPIKAKQDW RSQLAHSTNI
LAVILDKHFT ASMKEPFDAR PELESAMKAV LTQKKLFFSL EWESKTLKQY KSVLTHLVNK
QIRVITLLEL LLQTRWTDED SASYAKVNQV ALILQSSLLE LSEFLTGRRT DFPALPEKMA
INLHQELLAS LDRDEQQEFS LTGYSWLIYQ LAKTIESIYA EVDVISQAYE RKRR
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