| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0682 |
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| Symbol | |
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| ID | 5612510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 823041 |
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| End bp | 823940 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640931526 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472421 |
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| Protein GI | 157373821 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.095942 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATAC TACTGGCCAT GATCCCCGCA TTTTTCTGGG GAACCACCTA TGCGGTGACT
CAATATACCC TCCCCGATTG GCCGCCACTG TTGCTCGGTG CGTTAAGAGC CTTGCCCGCT
GGGCTACTGC TTCTGGCCAT CAAGCCAAGC ATGCCCAAGC GATCAGAATG GGGAGTACTC
TTCAGGCTCG GACTAATCAA TATCGCGGCG TTTTTCAGCT TAATCTTTGT GATGGCGTTA
ACTCTGCCAT CCGCCATCTC CGGTGTAGGT ATGATCTCTG TACCCGTCTT CGCCATGCTC
TATCACTGGG CCGTCAATAA GCGCCGCCCT AATGCGATAC AAGCTTTCTT CGGCTTAGTA
TTAATTGTAC TGGCCTGGCT GCTATTCGAC CCGGGCTCTA TCAGTTTAAG CCCAGTTGGA
TTAATGGCTT TACTCGCCGC CATTCTATGT ATTGTCATCG GCAGCTCTAT TACCAAGTCT
CTGGCCGATC GCATCCACTG GTGGAGTATT TTGACCTGGC AACTGATCAT AGGGGGTACC
CTGCTGGCCA TTGCGGCCGC GGTTCATGCC CTGTTTTCAC CCGGTACATA TCTGGAAGCT
GTACAAGGCT TTAGTTCGGC CAATGGCGCA GGCCTGTTGT GGATAACCCT TCTCAATACG
GTATTGGGTT ACATCATGTA TGTTTGGCTG CTGCAGAGAA TGACGGTTGT CGACTTTACC
TTCGGTGGCA TCGCCAACCC GATCGCAGGC ATAGTCTCAG GCATGGTGTT ACTCAATGAG
TCCTTCAGCC CCCATCAGTA TCTGCTTATG GCTGGCATGA TATTGACCTC ACTATTGCCA
CAGATCATTC AACTAATCAG AAATAGAAAG CCTCACTCCG TCGCAGTTAA GAGCTCCTGA
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| Protein sequence | MNILLAMIPA FFWGTTYAVT QYTLPDWPPL LLGALRALPA GLLLLAIKPS MPKRSEWGVL
FRLGLINIAA FFSLIFVMAL TLPSAISGVG MISVPVFAML YHWAVNKRRP NAIQAFFGLV
LIVLAWLLFD PGSISLSPVG LMALLAAILC IVIGSSITKS LADRIHWWSI LTWQLIIGGT
LLAIAAAVHA LFSPGTYLEA VQGFSSANGA GLLWITLLNT VLGYIMYVWL LQRMTVVDFT
FGGIANPIAG IVSGMVLLNE SFSPHQYLLM AGMILTSLLP QIIQLIRNRK PHSVAVKSS
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