Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0676 |
Symbol | |
ID | 5612826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 816689 |
End bp | 817777 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640931520 |
Product | cysteine synthase A |
Protein accession | YP_001472415 |
Protein GI | 157373815 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0031] Cysteine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCTT CTCCACATTC TCAAGAGCGA CCTCTCACAC TCTCGCCTGT TTTGGGAAAT GTCACCCAGC TTATCGGAAA CACAGACCTG CTGCGTATCA ACAGTATTTC AGATCTGACT GGCTGTGAAA TATTATTGAA GTGCGAACAA CAGAATCCGG GCGGTTCGAT TAAAGATCGA GCTGCACTGC AGATGGTTCA GGATGCGATT TTCAGCGGCA AACTTAAGCC GGGTATGACC ATAGTCGAGG GGACTGCGGG GAATACCGGT ATAGGGCTGG CGTTGGTGGC TAAGGCGCTC AGGTTTAAGA TGCTGGTGGT CATGCCCAGG GGCCAGGCCC CTGAAAAAGA GCAGATGATT AACCTGTATG GTGCAGAGCT GTTGCTGGTT GACGCCTGTC CCTTCGCAAA CCCCAATCAC TTTTATCACA CAGCGAAACG CATTGCCGAG GGAAACGATA ACTACTGGTG GGCCGATCAG TTTGAAAATA CCAGTAACAG TAAGGCGCAT TATGAGCACA CCGGACCGGA GATCTGGCAG CAGACTCAGG GAGAAATAGA TGCATTAGTC TCAGTGGCCG GGACCGGAGG TACCATTGCC GGAAACTCAC GTTACCTGTC TGAAATGCAT CATGGATTGA AAACCTGGCT GGTGGACCCC GATGGCTCGG GGATCTACGC CTACCTTAAA ACCGGCCAGT ATGTGTCCAG CGGCAGCTCC TTTACCGAAG GGATAGGCAT CATGCGCAGC GTCGAAAACT TCCGTCAGGC TAAGGTGGAT AAGGCTATCA CACTGCCAGA CAGGGATCTT ATCGCCATTG CACGTCACGT TAGGGAATGC GACGGTATTG CTTTAGGCAG TAGCTCGGCG TTGAATGTCG CAGGTGCACT GTACGCCGCG GCAAAAATGG GGGCGGGGAA GACTATTGTG ACGTTTTGCT GCGATCTAGC CGAACGCTCC TCCTCTAAAC TCTATAATGA AGATTTTCTG GTTGAAAAAG GGTTCTCAGA ATCCTGTGAG TCCATTGAGG AGATGTTTGA GCGTTATCAA AATGAACCTG CAGAAGCGGT CGTCGATGTT CATCGTTAA
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Protein sequence | MKSSPHSQER PLTLSPVLGN VTQLIGNTDL LRINSISDLT GCEILLKCEQ QNPGGSIKDR AALQMVQDAI FSGKLKPGMT IVEGTAGNTG IGLALVAKAL RFKMLVVMPR GQAPEKEQMI NLYGAELLLV DACPFANPNH FYHTAKRIAE GNDNYWWADQ FENTSNSKAH YEHTGPEIWQ QTQGEIDALV SVAGTGGTIA GNSRYLSEMH HGLKTWLVDP DGSGIYAYLK TGQYVSSGSS FTEGIGIMRS VENFRQAKVD KAITLPDRDL IAIARHVREC DGIALGSSSA LNVAGALYAA AKMGAGKTIV TFCCDLAERS SSKLYNEDFL VEKGFSESCE SIEEMFERYQ NEPAEAVVDV HR
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