| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0671 |
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| Symbol | |
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| ID | 5612523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 811748 |
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| End bp | 812926 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640931515 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472410 |
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| Protein GI | 157373810 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCA CCATAATTGG GGCTGGTAAT GCTGGTTCTG CTTGTGCGTT TATGGCTGCT
GAGGCAGGAC ATAAAGTAAG ACTATTGAAG ACTTCGAACC GTATTACTCA TGATGACCAT
TTTGAAGCTA TGGTCAAAAA CAGGGGAATA TATTGCATCG ATAACACAAG AAAAGGGCAT
TTTACAGATA GTGCTGATGA TGCCGAAAAA ACCTTTCAAC CATTAGAATT GATTACGCGA
GACCCTAAAG AAGCGATCGA GGGAACCGAT GTAATAATGA TTTTTATTCA AACCACATAC
CATCCGGCTT TAGCCGAAAG AATCGCGAAA TACTTCACTG ATGATCAATT AGTTATCCTA
GTTCCAGGGT ATGCAGGCAG TATCTTCTAT AATAAATGTT GCGATAATAA TCCAATATTT
GCCGAAGGGG AATCTACCCC TAATGACGCA AGAGTGGTTG AACCTGGCAC AGTGAAAGTC
CTATTTAAAA ATGCCAGAAA TTCGCTGTCA TTTTTCCCCG CCACCAGAAC GGATGAAGGA
ATGGCCCTTG CATCCCGCTT GTTCCCTGCC TACAACATTG AAAAGAGCAA AGTTCGAAAA
AATATATTCG AATCTGCACT ACACAATCCC AATATCATTG TTCACACTAT CGGGCAGTAT
GTTATGTATC CGATGCTTGA GTATTGTGCA AAGCATCACC CTGATGAAGT GCCATATATG
TACAGAGATG CGCTTTCAAC TGACATGGCA TGGCTAATGA TAGATAAATT AGACGCTGAA
AAGATGGCGG TGTTAAATGC TCTGGGATGT GAACCCATTC CTTATCTGGA AGCTTGTTTA
TTCAGAAATG AAGAAGATCT TAATCAAGAT CCCAGAGAAG TTTTTGAAAG CTATAAAATC
TCATCACCTC CAGGCCCTTA TAGTTTCGAT AATAGATACG TAACTGAAGA TGTTCCTATG
GGGCTGGTTT TATTATCCTC ATTAGGCGAA AAGTTAGGTA TTAACATGCC TGAGTGTAAT
CGTTTGATCG AAATGTGTGG CGGTATTTTA GAAAGAGATT TTTATGAAGA GGGCAGAACG
TTAGCTTCGT TAGGGTTAGA TGAACTAACA AGGGAGGAGT TATTGCATTT TGTAGAAATA
GAAAAGTCGG GAACGACCAC TTTAGCAGCG GTCGTGTGA
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| Protein sequence | MKITIIGAGN AGSACAFMAA EAGHKVRLLK TSNRITHDDH FEAMVKNRGI YCIDNTRKGH
FTDSADDAEK TFQPLELITR DPKEAIEGTD VIMIFIQTTY HPALAERIAK YFTDDQLVIL
VPGYAGSIFY NKCCDNNPIF AEGESTPNDA RVVEPGTVKV LFKNARNSLS FFPATRTDEG
MALASRLFPA YNIEKSKVRK NIFESALHNP NIIVHTIGQY VMYPMLEYCA KHHPDEVPYM
YRDALSTDMA WLMIDKLDAE KMAVLNALGC EPIPYLEACL FRNEEDLNQD PREVFESYKI
SSPPGPYSFD NRYVTEDVPM GLVLLSSLGE KLGINMPECN RLIEMCGGIL ERDFYEEGRT
LASLGLDELT REELLHFVEI EKSGTTTLAA VV
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