| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0663 |
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| Symbol | |
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| ID | 5613117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 802516 |
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| End bp | 804519 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640931508 |
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| Product | beta-lactamase-like protein |
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| Protein accession | YP_001472403 |
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| Protein GI | 157373803 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2015] Alkyl sulfatase and related hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTG AATTGAATAT GGCCGTCACA ATCTTGTTAA GTCTTTCTTT GTTCGGTTCA
TTGGCATTTG CCAGTGGCGG TGGATCAGTT ATAGCTGCCA AACCTTTAGG TGTTGAGAAA
GATGCAACAA GTTTTACTCA GGAGATCAAC ACAGATCTGC TCAAAGTACT ACCGTTCAAA
GACTCTCGCG ATTTTAAAAA CGCACAAAAG GGTTTTATCG CTCGTGGAGA GGAGGTCATC
AAGGATAAAG ACGGAAACAT CATATTCAGC ACCAAGGAAT TTGACTTTAT GCAGAACTTG
AAAAAGAAAG CTCCTGCTAC AGTCAATCCA AGCCTTTGGC GTCAGATGCT TCTGGTGAAT
ATTGCAGGGC TTTTCAAAGT TCACGACCAC ATCTATCAAG TTAGGAATTA TGACCTTGCA
AACCTGACTA TCATCGAAGG GAAAAGTGGC CTGATCATTA TGGATCCGCT TGTTTCGGCA
GAAGCGGCCA AAGCAGCGCT TGATCTCTAC TTTGAACACC GCCCTAAAAA ACCAGTCAAA
GCCGTGATCT ATTCACATTC CCATGTTGAT CATTTCGGTG GGGTACGCGG GATTGTGAAT
GACGACGATC TAAAAGCTGG AAAGGTTAAA ATTTTTGCAC CTTACGATTT TATGGAAAAT
GCCATTGCTG AGAATGTTAT GGCGGGGAAT GCTATGAGTC GCCGGGCCTC TTACATGTAT
GGCAACGTAC TTCCAAAAGA TGTTAAAGGT AATATCGGAG CTGGTCTGGG TACCACAACC
TCAGCAGGAA CAGTCACACT GGTTGCGCCG ACAAATATCA TCAAAGAAGA TTGGGAAGAT
CATGTTATAG ACGGACTCCA TTTTGAATTT CAGTTGACAC TGAATACGGA AGCGCCATCT
GAAATGCATT ACTACATTAA AGAGTATCGT GCATTATGCC CTGCCGAAAA CGTCAACCAC
ACCATGCATA ACCTCTACAC CCTGCGCGGG GCAAAAGTAC GAGACTCAAA AGTATGGGCT
AAACATATTG ATAATATGCT GTTGAAATGG GGGGATAAAT CTGACGTACT TTTTGCACCA
CACCACTGGC CTAGCTGGGG CACTCAAGAT ATTAAAAAGC ATGTTGCTCA ACAACGTGAT
ACTTACAAAT TCCTCCACGA TCAGGTACTC CGATTAGCAA ATCACGGCTA TACCATGGAT
GAAATTGGCG ATATGGTAAA ACTGCCTGCC GAGCTTGACA ATAACTGGGC AAGCCATGGC
TACTACGGTA GCATCAGCCA CAATGCACGT GCGATCTACA ACTTCTATCT GGGCTATTTT
GACGGAAACC CTGCTCACCT CCATAAGCTT CCACCAGAAC CTGCGGCTAA AAAATATGTC
GAGTTTATGG GAGGCGCAGA TAACGTTATT AAACAAGCCA AAAATACTTA TGCTAAGGGC
GAATATCGTT GGACTGCTGA GGTGTTAAGC CATGTTGTCT TTGCCGAACC AGACAACCAG
CAAGCAAAAG CTCTCCTGGC TGATACTCTA GAACAGTTAG GATATGTTGC TGAATCAGGT
CCATGGCGCA ACTTTTATCT ATCAGGTGCG CGCGAATTGC GCACAGGGGT CAAAGCGATG
CCAACGCCGA ATACCGCAAG CCCGGATATT GTTCAAAACA TGTCTGCAAC CATGTTGCTC
GATTACATGG CGGTACGACT GAATCCGGAG AAGGCCGTAG GTAAAAAGAT GAAAATTGGA
TTTAACTTCA CTGATACCAA CGAGCTATAT ACTCTGATCT TACAGAACTC TACACTTAAT
AACCGTATTG GTCTTGATGA TGACGCTGAC ACTAGGATTG TGACTACCCG TGTAACACTC
GATAATATTA TGCTGGGTAA ATTGACGATA GCCGAAGGCG TGAAGAACGG TGCAATAAAA
GTTGAAGGCA CCAAAGGTAA ATTTAAAGAG CTTCAAGGTA TGTTGGATGA TTTTGAATTT
TGGTTCAATA TCGTAACCCC ATAA
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| Protein sequence | MKRELNMAVT ILLSLSLFGS LAFASGGGSV IAAKPLGVEK DATSFTQEIN TDLLKVLPFK
DSRDFKNAQK GFIARGEEVI KDKDGNIIFS TKEFDFMQNL KKKAPATVNP SLWRQMLLVN
IAGLFKVHDH IYQVRNYDLA NLTIIEGKSG LIIMDPLVSA EAAKAALDLY FEHRPKKPVK
AVIYSHSHVD HFGGVRGIVN DDDLKAGKVK IFAPYDFMEN AIAENVMAGN AMSRRASYMY
GNVLPKDVKG NIGAGLGTTT SAGTVTLVAP TNIIKEDWED HVIDGLHFEF QLTLNTEAPS
EMHYYIKEYR ALCPAENVNH TMHNLYTLRG AKVRDSKVWA KHIDNMLLKW GDKSDVLFAP
HHWPSWGTQD IKKHVAQQRD TYKFLHDQVL RLANHGYTMD EIGDMVKLPA ELDNNWASHG
YYGSISHNAR AIYNFYLGYF DGNPAHLHKL PPEPAAKKYV EFMGGADNVI KQAKNTYAKG
EYRWTAEVLS HVVFAEPDNQ QAKALLADTL EQLGYVAESG PWRNFYLSGA RELRTGVKAM
PTPNTASPDI VQNMSATMLL DYMAVRLNPE KAVGKKMKIG FNFTDTNELY TLILQNSTLN
NRIGLDDDAD TRIVTTRVTL DNIMLGKLTI AEGVKNGAIK VEGTKGKFKE LQGMLDDFEF
WFNIVTP
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