| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0653 |
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| Symbol | |
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| ID | 5613458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 793451 |
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| End bp | 794290 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640931498 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472393 |
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| Protein GI | 157373793 |
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| COG category | [K] Transcription |
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| COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGATA AAATCATCTC CAACAGTCGA GCGTTATTAC AAGAGTGTGA CGCTGTTTTA
ATAGGTGCTG GCTCCGGCCT GTCAACTGCG GCAGGTATTG AGTATGGTGG CGAACGCTTC
CAGCGGAATT TTCCCGACTA TATTGCTAAA TATGGTATGA GAGATATGTA CTCGGCTGGT
TTTTACCCAT TTGCTTCTTT GGAAGAAAAG TGGGGATTCA GGTCGAAACA AGTCAAACTT
AATCGTTACG ATACTAAAGT GGGTGATGTT TATTTGAAAC TGCTCGATTT GGTTCGTCAC
AAGCCATACT TTGTTATTAC GACCAATGTC GATGCTCAAT TTGAACGCGC AGGTTTTGAT
AAGAGAAATA TTTTTGCGGT GCAGGGAGAT TACGGTAAAT TTCAATGTAC AGTGCCGTGT
CACAACAAGC TGTATGATAA TGAATCTCAG ATTTCTGCAA TGGCAGCTCA ACAAGCTGAT
TGTCAAATAC CCAGCGAATT GGTGCCGTAT TGCCCAAATT GCGGCGAACC AATGATGCTG
CATGTTCGAA TTGATAATAC CTTTGTGGAA AATTCAAACT GGCATGCTGC CAAACAAGGA
TACAGCGAAT TTTTGGGTCA GTTTCATAAC CAAAAATTAC TCCTGTTGGA GCTTGGCGTT
GGTTTTAACA CGCCAACCAT TATTCGCTTT CCATTTGAGC AATTTAGCCG CCAATTTCCT
CACACTCATT TAATCAGGCT AAACAAACAT AACGCCAGGT CACTGGATAC ACTCAAAACG
AGCAATTTGT TAGTGGAAGG TGATATCTGT CAGTGGCTGA ATAAACTGAC CGAACTCTAA
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| Protein sequence | MDDKIISNSR ALLQECDAVL IGAGSGLSTA AGIEYGGERF QRNFPDYIAK YGMRDMYSAG
FYPFASLEEK WGFRSKQVKL NRYDTKVGDV YLKLLDLVRH KPYFVITTNV DAQFERAGFD
KRNIFAVQGD YGKFQCTVPC HNKLYDNESQ ISAMAAQQAD CQIPSELVPY CPNCGEPMML
HVRIDNTFVE NSNWHAAKQG YSEFLGQFHN QKLLLLELGV GFNTPTIIRF PFEQFSRQFP
HTHLIRLNKH NARSLDTLKT SNLLVEGDIC QWLNKLTEL
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