| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0651 |
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| Symbol | |
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| ID | 5613256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 789408 |
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| End bp | 792611 |
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| Gene Length | 3204 bp |
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| Protein Length | 1067 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640931496 |
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| Product | metal dependent phosphohydrolase |
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| Protein accession | YP_001472391 |
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| Protein GI | 157373791 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2206] HD-GYP domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGCCG TGGCCAAGAT GAGTAATAAG CGATTTACCA TTCGTGTTAC TGTGGTGGGG
ATCTTTATTT TAGCCACAGT ATTAACCGCA GCTTTTGCCA TTAGTCTGCA ATATTACTTC
AGTAAAACCA TGGCCGCTGA TTCAGCCGTC AAGCTCTATA ATCTTACCGC AGAAAATACC
AGTAGTTACC TTGCCCAAGT CGATAGTCGG GCGATTAATA CCACTCAGTT ACTCTCAAAA
TTTGATGATC TTGTGATTGA TGGTGGCTTT AACCCTGAGG CCCAACAAGC ATTTTCTGAG
GTCATGCGAA CCAATTCATT GTTTTATGCC ATCTATATCG GTATGCCTAA TGGTGATTTT
TACGAGCTGA TAAATCTTGA TGCTCACCCG GTGATTAGAG AGCAGCTTAA TGCATCTCAC
CTGGATAGAT GGGTGATTAT CACTATCAGT GGTGAGGGTG AGTTACGTCA AAGGGAGCAA
TCCTATCTCG ACGAGCAGTT TAACCTGCGT GTCTCACATA CTGAGACCAG TGAATATGAC
GCCAGAATAA GGCCGTGGTT TGTTGATGCA AACACCGAAA CTGTCTCTAA AACAGAACCT
TATTTGTTTC AGCACCTGCA ATCACCGGGT CAAACCTATT CGATAAAACT ATCTGACTCA
GGTGCGGTTC TAGCACTGGA TATTGCACTT TCAACGCTTT CTGATTATTT GGCGATACAG
GGAAAAGACG ATAAGGGCGT CACCGGGAAA AAGATCTACC TTTATAAGAA GAGTGGTGAG
CTGATTGCGT CGAACCAAGT AGACAAAAGA GGCGTTGAAA TACCTGAGTC TAAAGCGCTG
GCTTTGAGTG CGGAGCAGCG ATCGCTTGTT GCAAATACAG AGCCCTTGTT GGTCTCAAAT
GAAACCAATT GGGCACCTAT CGACTTTGCT ATATCCGGTA TGCCTCAAGG TTACAGTATC
GATCTGCTTA ATCTGGTTGC AGATATGACG GGGTTAGAGC TCAAGTATAT CAATGGCTTT
AGCTGGGGTG AGTTGACTGA GAAGTTTAAA TCCAAAGATT TAGGCATGTT GCACTCTGTG
GTTAAAACCG ATGAAACGCG TTTATTAGGG GAGTTTAGCG AGCCTTTTCT TGAGCTTCCT
TTCGCTGTGG TTACTCAAAA AGGCACGACT CCAATAACGC ATATCAAGCA GTTAAACGGT
AAGCAGCTGG CGATACCGAC GGAGTGGTCT ATTGTCGAGG TTATTAGGAA AAACTATCCG
CAGATTGAGA TAGTTGAGAT GCACTCCACC TACGACATAC TACATGCGGT TGAGCAGGGG
GAGGTTTTTG CCGCGCTCGA TAACAGCATC ATATTGCACT ACACGGCGAA CCAATTCTTT
ATTGAGCAGG TTCAATACCA TGAGCAACTC GATTTCTCGC CACTAACTGT CGATACCGGC
CTGTATGTCG TGATGTCGAG TCAAAACTCA GCCATTATTG AGGTGATAAA TCTGGCACTA
GCCAACATCA CCCCAGAGCA GACGCAAGCG CTCCGGGCTA AGTGGTTTGG TGAGGGAGAG
AAGCAGAGTT TATCGACGCA GGGAACCGTC CCCTATGAAG CCTTGATCGA CTTGGCTCGT
GAGCCAAAAA ATCAAAATCA ATTAATTCGT CGCGAATTAA ATGGTGTCGA AAAGTTTATC
TATGTGACCC CTTTTGGAGA TAGCACTGCG GGAAGTGAGG AGTACTTTGC TATCGTCGTT
CCAACGGAGC AGCTACTCGC GACCAGTGTC GAGAAAGTGC AGCAGTCTAT TCTACTCACC
AGCCTCTGTT TACTGTTGAT ATTGCCTGTT TCCTGGTTGT TTTCATCGCC TATCATTCGT
CCTATCAAGT TATTAGCTAT CGAAAATGAG AAGATCAAAA ACCGCCAGTA TGATGAGGTG
AAGAGAATCG ATTCCAATAT CACTGAACTG GATGATCTGG CCCACTCTAT GATGGATATG
TCGGGGGCGA TTAAGGCATA TGAAGAGAGT CAAAAGGAGT TGATGGAGTC TTTTATCAAG
CTAATTGCAC AGGCTATTGA TGATAAATCT CCCTATACCG CTGGGCACTG TAATCGTGTA
CCGGAACTTG GCTTAATGTT GGCTGAGGCC GCAGAACAAT CTCAGTCAGC TCCCTTTAAG
GATTTTAAAT TTCATTCGGC CGATGAGCAT CGGGAGTTTA GAATTTCCGC CTGGTTGCAT
GATTGCGGCA AGATCACCAC GCCAGAGTAT ATCGTCGATA AGGGCACTAA GCTTGAAGCC
GTGTATAACC GCATACATGA AGTCAGGATG CGCTTTGAGG TGCTGTGGCG TGATGCCGAG
ATTGATTATC TCAAGAGTGC AGCATCTGGA AAGGAGTCGA GTGAGCTCTA CCTTGCGAAG
TTGGCCCATA AACGAAATCA ATTGATAGAA GACTTTGAGT TTATCGCCAA TGCAAATGTC
GGCGGTGAAT TTATGGGGCA AGAGGCTAAA GAACGCTTGG CTGAGCTCGC CAACACCACC
TGGGAGCGCC ACTTCGACGA TAGGCTTGGC CTTTCACCTG TCGAAGAGCT TAATCTTAGT
GAGCAGGAAG CTAAGGTGAG TTATCCCGTT ACAGAGCCGT TATTAAGGGA TAAACCCGAA
CACATTATCA AACGGATTAA TTCGGTGGAG TTTGACCCTA AGTTTGGTAT TAAGATGGCG
ATTCCTGAAA ATCAATATAA CTTAGGCGAG CTTTATAACC TCTCCATCTC AAGAGGTACC
TTGACCAGTG AAGACAGGTT TAAAATTAAC GAGCATGTCA CCAGCACCAT TAAAATGCTG
GAAAACCTGC CGTTCCCTCC CGAGCTTGCG CGTGTGCCGC GCTACGCTTC AACTCACCAT
GAAACCTTAA AGGGGACGGG TTACCCACGA AAGCTCAGCG CTGAAGACTT ATCGATCCCT
GAGCGTATTC TGGTGGTGGC CGATATTTTT GAAGCTCTGA CCGCTGCCGA CAGACCTTAT
AAAAAGGCGA AGCCACTCAG TGTTGCTATC GATATTCTGT ATAAGATGGC ACTGGACCAG
CATCTGGATA TGGAAATTTT TAAGTTGTTC CTCTCGAGTG GGATATATCT GGAATATGCC
AGTAAATTCC TCGACCCGGC GCAGACGGAT GAAGTGGATG TGGCTAAGTA CTTAAACGAT
GCAGAAGTGC GTCAAAGCGC TTAA
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| Protein sequence | MGAVAKMSNK RFTIRVTVVG IFILATVLTA AFAISLQYYF SKTMAADSAV KLYNLTAENT
SSYLAQVDSR AINTTQLLSK FDDLVIDGGF NPEAQQAFSE VMRTNSLFYA IYIGMPNGDF
YELINLDAHP VIREQLNASH LDRWVIITIS GEGELRQREQ SYLDEQFNLR VSHTETSEYD
ARIRPWFVDA NTETVSKTEP YLFQHLQSPG QTYSIKLSDS GAVLALDIAL STLSDYLAIQ
GKDDKGVTGK KIYLYKKSGE LIASNQVDKR GVEIPESKAL ALSAEQRSLV ANTEPLLVSN
ETNWAPIDFA ISGMPQGYSI DLLNLVADMT GLELKYINGF SWGELTEKFK SKDLGMLHSV
VKTDETRLLG EFSEPFLELP FAVVTQKGTT PITHIKQLNG KQLAIPTEWS IVEVIRKNYP
QIEIVEMHST YDILHAVEQG EVFAALDNSI ILHYTANQFF IEQVQYHEQL DFSPLTVDTG
LYVVMSSQNS AIIEVINLAL ANITPEQTQA LRAKWFGEGE KQSLSTQGTV PYEALIDLAR
EPKNQNQLIR RELNGVEKFI YVTPFGDSTA GSEEYFAIVV PTEQLLATSV EKVQQSILLT
SLCLLLILPV SWLFSSPIIR PIKLLAIENE KIKNRQYDEV KRIDSNITEL DDLAHSMMDM
SGAIKAYEES QKELMESFIK LIAQAIDDKS PYTAGHCNRV PELGLMLAEA AEQSQSAPFK
DFKFHSADEH REFRISAWLH DCGKITTPEY IVDKGTKLEA VYNRIHEVRM RFEVLWRDAE
IDYLKSAASG KESSELYLAK LAHKRNQLIE DFEFIANANV GGEFMGQEAK ERLAELANTT
WERHFDDRLG LSPVEELNLS EQEAKVSYPV TEPLLRDKPE HIIKRINSVE FDPKFGIKMA
IPENQYNLGE LYNLSISRGT LTSEDRFKIN EHVTSTIKML ENLPFPPELA RVPRYASTHH
ETLKGTGYPR KLSAEDLSIP ERILVVADIF EALTAADRPY KKAKPLSVAI DILYKMALDQ
HLDMEIFKLF LSSGIYLEYA SKFLDPAQTD EVDVAKYLND AEVRQSA
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