Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0645 |
Symbol | |
ID | 5613735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 784291 |
End bp | 784584 |
Gene Length | 294 bp |
Protein Length | 97 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640931490 |
Product | ISxac3 transposase |
Protein accession | YP_001472385 |
Protein GI | 157373785 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2963] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGGAA AACGATATCC CGACGAGTTC AAAATCGAAG CAGTTAAACA GGTCACAGAG CGTGGTCACC AGATCGCCGA TGTGGCAGAA AGATTAGGCG TCACTCCCAA AAGTTTGCAC AACTGGATTA ACAAGTTTGA TAAGCCAGAA AAGCAACACA TCACCATTGA TAATCAGCAA GACGAAATAC GTAAACTGAA AGCGGAACTA CGTCGGGTAA CCGAAGAGAG AAATATCCTA AAGGAGGCCG CCGTGTACTT TGCAAGCGAG TCAAAGAAAA GTACACGTTC ATAA
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Protein sequence | MRGKRYPDEF KIEAVKQVTE RGHQIADVAE RLGVTPKSLH NWINKFDKPE KQHITIDNQQ DEIRKLKAEL RRVTEERNIL KEAAVYFASE SKKSTRS
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