Gene Ssed_0645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_0645 
Symbol 
ID5613735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp784291 
End bp784584 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content45% 
IMG OID640931490 
ProductISxac3 transposase 
Protein accessionYP_001472385 
Protein GI157373785 
COG category[L] Replication, recombination and repair 
COG ID[COG2963] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGGAA AACGATATCC CGACGAGTTC AAAATCGAAG CAGTTAAACA GGTCACAGAG 
CGTGGTCACC AGATCGCCGA TGTGGCAGAA AGATTAGGCG TCACTCCCAA AAGTTTGCAC
AACTGGATTA ACAAGTTTGA TAAGCCAGAA AAGCAACACA TCACCATTGA TAATCAGCAA
GACGAAATAC GTAAACTGAA AGCGGAACTA CGTCGGGTAA CCGAAGAGAG AAATATCCTA
AAGGAGGCCG CCGTGTACTT TGCAAGCGAG TCAAAGAAAA GTACACGTTC ATAA
 
Protein sequence
MRGKRYPDEF KIEAVKQVTE RGHQIADVAE RLGVTPKSLH NWINKFDKPE KQHITIDNQQ 
DEIRKLKAEL RRVTEERNIL KEAAVYFASE SKKSTRS