Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0644 |
Symbol | |
ID | 5613546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 783434 |
End bp | 784201 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640931489 |
Product | transposase InsF for insertion sequence IS3A/B/C/D/E/fA |
Protein accession | YP_001472384 |
Protein GI | 157373784 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGTAACC GAGAAGCTGA AGATAAAAGA TTGCTAGGTA AGATTAAGCA ATTTTGGCTG GAGAGTGGCT GTGTGTATGG TTATCGAAAT ATTACATTGG ACCTCAAGGA TGACGGTGAA TCGGTTGGTA AAAATCGTGT GCATCGCATT ATGAAAGCTG CTCAGATTAA GGCTGTACGA GGCTATAAGC GTAATCCAAG CTTTGGTGGT GGCGATGTTA GCCATACAGC ACCAAACACG CTAAATCGTG GCTTTGATGT CGCTAAGCCT AACAAAGTTT GGGTGACCGA TTTTACTTAT ATCCGCACCC ATGAAGGTTG GTTGTATCTA ACTGTTGTGA TCGACCTATT CTCACGACAA GTTGTCGGTT GGACGATGAA AAGCACACCT AAGGCGGACT TGGTTATTGA CGCGCTATTG ATGGCGATAT GGCGACGTTC TCCGACCGAA AAGGTACTGA TACATTCCGA TCAAGGTGTG CAATATACCT GTTCAGACTG GCGTAGTTTT CTTAAAGAAC ACAACCTTGA AGCAAGTATG AGCCGCAGAG GAAACTGTCA TGATAACGCT GTTGCAGAGA GCTTTTTCTC ACTCCTAAAG AAGGATAGAG TTAAGCGAAA AGTCTACAAA ACCAGAGACG AAGCACGCTC TGAAATATTT AACTATATAG AATATTTCTA TAATCCAGTT CGACATCATG GTAGTAATAA CGGACTGTCT CCGATGAAGT TCGAAAAGCA GTATTTTGAG AAACTAGAAA GTGTCTAG
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Protein sequence | MSNREAEDKR LLGKIKQFWL ESGCVYGYRN ITLDLKDDGE SVGKNRVHRI MKAAQIKAVR GYKRNPSFGG GDVSHTAPNT LNRGFDVAKP NKVWVTDFTY IRTHEGWLYL TVVIDLFSRQ VVGWTMKSTP KADLVIDALL MAIWRRSPTE KVLIHSDQGV QYTCSDWRSF LKEHNLEASM SRRGNCHDNA VAESFFSLLK KDRVKRKVYK TRDEARSEIF NYIEYFYNPV RHHGSNNGLS PMKFEKQYFE KLESV
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