| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0629 |
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| Symbol | |
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| ID | 5609990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 766234 |
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| End bp | 769320 |
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| Gene Length | 3087 bp |
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| Protein Length | 1028 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640931474 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001472369 |
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| Protein GI | 157373769 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATTTCG CTCAATACTC AATCGAACAT AAAGTTGTTA GCTGGATGTT TGCCCTACTG
CTGCTCGTGG GGGGCAGTTT CTCATTTTTT GGGCTAGGTC AGCTCGAATT CCCTGAGTTC
ACCCTCAAGC AGGCGCTTGT GGTCACTGCA TACCCGGGCG CCTCACCCGA ACAGGTAGAG
GAGGAGGTCA CTCTTGCTCT GGAAGATGCC ATTCAACAGC TCGATGCCGT TAAACATATC
ACCTCGGTGA ACAGTGCAGG TCTATCTCAG ATTGAAGTTG AGGTAGAAGA TCATTACGAT
GCGACAGAAC TGCCACAGGT ATGGGATGAG CTTCGCCGTA AGGTCAACGA CAAACTGGGC
GAGCTCCCCC CCGGCGCGAT GACACCGACT GTCATCGACG ATTTCGGTGA TGTCTACGGC
GTCTTGCTCA ACATCACAGG TGATGGCTAC ACGAGTCGTG AACTGCAAAA CTACGCCGAC
TTTCTAAGGC GTGAACTGGT ACTTGTCGAT GGGGTCAAAA AGGTCAATAT TGCCGGTAAA
ATTACCGAGC AGGTAGTTGT CGAGATATCA CAGCAGAAGC TCAACGCCTT AAGTCTGGAC
CAAGACTACA TCTATGGTCT AATCAACAGC CAAAACGTCG TCTCTAATGC AGGCAGCATC
CGGGTCGGCG ATAACCGTAT CCGTATACAT CCAACCGGTG AGTTTAATCA GGTTCAACAG
ATGGAACGTC TGCTTATCAG TGCACCTGGC AGCACTAAGC TTATCTATCT TGGCGATATC
GCTAAGATCT ATAAAGATAA CGACGAGACA CCATCAGAGA TCTATCACGG CAATGGCGAT
GCCGCACTAT CTGTGGGTAT TGCATTTTCA AGCGGTGTAA ACGTGGTCGA TGTAGGTGCA
TCCATCAACC AAAGGCTTGC CGAGCTTGAT GATCAACGTC CTATCGGGCT GGAGCTTGTT
ACGGTCTATG ACCAGAGCAA GATGGTTGAC CAAACTGTCT CAGGTTTCTT AGTCAACCTG
GCAGAATCTA TTGCCATCGT GATCGGCGTA CTGCTGATAT TTATGGGAGT GCGGGCGGGT
CTGCTGATGG GGCTGGTACT GCTACTGACC ATATTAGGCA CCTTTATCAT GATGAATGTG
CTCAATATCG AGCTACAGAT CATCTCGCTG GGAGCACTGA TCATAGCCCT GGGTATGTTA
GTGGATAACG CCATCGTGGT TACCGAAGGG ATCCTTATCG GCATAAATCG AGGTCAGTCC
CGACTGGAAA CCGCCAAAGA GGTGGTGTCA CAGACTCAGT GGCCACTGCT TGGCGCTACT
GTCATAGCTA TCCTTGCCTT CGCACCTATC GGCCTGTCCG ACACGGCAAC CGGCGAGTTC
TGTGTTTCCC TGTTCCAGGT GCTGCTGATC TCTTTGTTTA TCAGCTGGAT CACCGCCATG
ACCCTGACCC CGTTCTTCTG TCACCTGATG TTCAAAGATG GCGAAGTCAG CAGTGATGAA
AATGACGACC CTTACAAGGG CTGGGTATTT CAGTTATACC GTGGCTGCTT AAACCTGGCG
ATGCGATTTC GCGCCATCAC CATACTTATC GTTGTCGCCG CTCTGTTCTC CTCGGTAATG
GGCTTCGGAC ATGTAAAAAA TGTCTTCTTC CCAGCCTCTA ATACACCTAT GTTCTTTGTC
GATGTGTGGA TGCCTGAGGG CACCGACATC AAGGCAACAG AGCACCTGCT CGGGCGCATC
GAACAGGACT TGATGCAACA GCAGGAGGTC CATGATATCG GTCTGGTCAA TCTAACCAGC
GTGATAGGTC AAGGTTCACA GCGATTTGTA CTCTCCTACG CACCGGAAAA AGGCTATAAC
GCCTACGGTC AGTTATTGAT TGAGATGACA GACCTCACCA CTCTCAACCA ATATATGCGA
ACCCTGGAGC GGGAGCTGAG CCTCAAATAT CCGGAAGCAG AATATCGCTT CAAATATATG
GAAAATGGGC CAAGCCCTGC GGCTAAGATA GAGGCACGCT TCTATGGTGA AGATCCAAAA
GTACTGCGCC AGCTAGCGAC CCAAGCAGAG ACTATCTTAG ATGCAGAGCC GACAGCCGTA
GGCGTAAGGC ATAGCTGGCG TAATCAGGTG ACCCTCATTC GTCCACAACT GGCACTGGCT
CAGGCGCGTG AGACCGGGAT CAGTAAGCAA GATCTAGATA ACTCTTTATT AGTTAACTTC
AGTGGTAAGC AGGTGGGTGT CTACCGTGAA AACAGCCATC TCTTGCCTAT CATAGCCAGA
GCACCGGCCG AAGAACGCTT AGATGCGGAC AGCTTGTGGA AACTGCAGGT CTGGAGCTCA
GAGAACAATC TGTTCGTACC GGCGTCTCAA GTGGTTTCCG AGTTCACCAC CGAATGGGAA
AACCCGCTCA TCATGCGCCG CGACAGGAAG CGTATGCTGG CAGTGTATGC CGACCCGATC
AACGGCACAG ATGAGACAGC CGACTCGGTA TTTCGGAAAA TCAGAGCCGA TATTGAAGCC
ATCGAGCTTC CAAGTGGTTA TGAACTCGAG TGGGGCGGAG AGTTTGAAAC AGCCGGCGAG
GCTCAGGTCT CGGTATTCAG CTCAATTCCT ATGGGATACC TGGCGATGTT CTTAATCACG
GTACTGCTGT TTAACTCGGT GCGTCAGCCT CTGGTTATCT GGTTTACCGT GCCACTATCC
TTGATCGGTG TGGTATCCGG ATTACTGCTA TTCGATGCAC CGTTTAGCTT TATGGCGTTG
CTCGGCCTGT TGAGTCTGAC GGGTATGATT ATCAAGAACG GTATCGTACT GGTCGATCAG
ATCAACCTTG AACTGAGTCA GGGCAAGGAG CCTTACCTTG CGGTCATCGA CTCATCGGTC
AGCCGCGTAC GCCCCGTGCT AATGGCGGCC ATCACGACCA TGTTGGGTAT GTTACCGCTA
TTGAATGATG CCTTCTTCGG CTCCATGGCG ATCACCATCA TCTTTGGTTT AGGCTTCGCT
TCGGTACTGA CACTTATCGT ATTGCCGGTG ACTTACACCT TAGCATTTAG AATTCCCTAT
CCACGTAATA CCAATTGCAT TAAATAA
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| Protein sequence | MNFAQYSIEH KVVSWMFALL LLVGGSFSFF GLGQLEFPEF TLKQALVVTA YPGASPEQVE
EEVTLALEDA IQQLDAVKHI TSVNSAGLSQ IEVEVEDHYD ATELPQVWDE LRRKVNDKLG
ELPPGAMTPT VIDDFGDVYG VLLNITGDGY TSRELQNYAD FLRRELVLVD GVKKVNIAGK
ITEQVVVEIS QQKLNALSLD QDYIYGLINS QNVVSNAGSI RVGDNRIRIH PTGEFNQVQQ
MERLLISAPG STKLIYLGDI AKIYKDNDET PSEIYHGNGD AALSVGIAFS SGVNVVDVGA
SINQRLAELD DQRPIGLELV TVYDQSKMVD QTVSGFLVNL AESIAIVIGV LLIFMGVRAG
LLMGLVLLLT ILGTFIMMNV LNIELQIISL GALIIALGML VDNAIVVTEG ILIGINRGQS
RLETAKEVVS QTQWPLLGAT VIAILAFAPI GLSDTATGEF CVSLFQVLLI SLFISWITAM
TLTPFFCHLM FKDGEVSSDE NDDPYKGWVF QLYRGCLNLA MRFRAITILI VVAALFSSVM
GFGHVKNVFF PASNTPMFFV DVWMPEGTDI KATEHLLGRI EQDLMQQQEV HDIGLVNLTS
VIGQGSQRFV LSYAPEKGYN AYGQLLIEMT DLTTLNQYMR TLERELSLKY PEAEYRFKYM
ENGPSPAAKI EARFYGEDPK VLRQLATQAE TILDAEPTAV GVRHSWRNQV TLIRPQLALA
QARETGISKQ DLDNSLLVNF SGKQVGVYRE NSHLLPIIAR APAEERLDAD SLWKLQVWSS
ENNLFVPASQ VVSEFTTEWE NPLIMRRDRK RMLAVYADPI NGTDETADSV FRKIRADIEA
IELPSGYELE WGGEFETAGE AQVSVFSSIP MGYLAMFLIT VLLFNSVRQP LVIWFTVPLS
LIGVVSGLLL FDAPFSFMAL LGLLSLTGMI IKNGIVLVDQ INLELSQGKE PYLAVIDSSV
SRVRPVLMAA ITTMLGMLPL LNDAFFGSMA ITIIFGLGFA SVLTLIVLPV TYTLAFRIPY
PRNTNCIK
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