| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0609 |
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| Symbol | |
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| ID | 5612576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 736712 |
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| End bp | 737593 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931454 |
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| Product | GumN family protein |
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| Protein accession | YP_001472349 |
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| Protein GI | 157373749 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3735] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000097988 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACAA GTCAACTGAA GCGATTAGTT GCATTGGTAT GTATGTTTGT GGCGATGGGG
CTGGCTTGTG CCCAAGCGGC ACCGCTGGAT ACGCCACCAT TTTATAAAAT TGAATATAAG
GGGAAGGTCT CCTATCTGTT GGGGTCGATT CATGTGGGCA AGGCAAATTT TTATCCTATG
CCTGAGCAAA TTGAATCTCT GTTCGATTCG GCTGAGTCCT TGGTGGTTGA AGCGGATGCT
GCCAGCGCTG ATATTGCCAC ATTGATCAGA AAGTACGGAG TAGGTCAGGC TCCTATCGAT
ATTGAGACTC AGGCTGTACT CGATAGTTAT TGTCAGAGAA GGGCGAGAGA GTGCGCCGCA
TTAAGTGGTT ATGCTCCCTG GTTGCAGTCG ATGCAACTGG GAATGGCCAG ATTTGAAGCG
CTGGGCTACA GCGCTGTATA TGGGGTCGAG CAGGTATTGA TCTCAAAGAA CAGGGGCAGG
CCTGTTTTGG AGTTGGAAAG TACCGAGTTT CAGTTTCAAC TTATGGCTTC ATTCGATGAT
AAGACCCAAT GGAGTATGGT TAAAGAGGCC ATCGAAGGAC CCGATGAAGA TATGCACGGC
CTGATTAGCT CATGGCGCAC AGGAGATGAA CTTCATCTTG CCGAATTGAT GGAGGGGCAG
ATGTCCGATG GAGACAATAA AGAGTTACTC GAGAAGATTT TATGGAAAAG AAATATCGAC
ATGGCGGCAA GAATAAGAGA GCTGATGCTC GACCCTGACA CTCCACAACC TATGTTTATA
GCTGTCGGAG CCGGGCATGT GGTCGGCGAC CGAAGCATGG TGCTTGAGAT GCAAAAATAT
GGTGCTGAGA CTACAAATTG TTGGCAGAAA CAGTGTAATT GA
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| Protein sequence | MATSQLKRLV ALVCMFVAMG LACAQAAPLD TPPFYKIEYK GKVSYLLGSI HVGKANFYPM
PEQIESLFDS AESLVVEADA ASADIATLIR KYGVGQAPID IETQAVLDSY CQRRARECAA
LSGYAPWLQS MQLGMARFEA LGYSAVYGVE QVLISKNRGR PVLELESTEF QFQLMASFDD
KTQWSMVKEA IEGPDEDMHG LISSWRTGDE LHLAELMEGQ MSDGDNKELL EKILWKRNID
MAARIRELML DPDTPQPMFI AVGAGHVVGD RSMVLEMQKY GAETTNCWQK QCN
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