| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0599 |
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| Symbol | |
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| ID | 5610158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 730228 |
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| End bp | 730920 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640931444 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472339 |
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| Protein GI | 157373739 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02001] conserved hypothetical protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAG CACTCAGAAC GACCTCTATA CTGGCCTCAG GCCTATTAAT GACCTTTTGC
GCTAATGCAA GTGTCACTGC AAATATTGGT GCCAGCTCTA ACTACCTCTG GCGAGGAGTC
ACTCAGACTC AGGACGCTGT CGCCGTTCAA GGGGGTATCG ATTATGAACA CGATAGCGGT
GTCTATCTGG GCACATGGGC TTCGAATGTA GATTTTGGCG ATGACACAAG CTATGAAATT
GATTTTTATG CTGGTTATGC AGGTTCAATT GGTGAAGACT TTGGCTACGA TATTGGTTAT
CTCTATTATG CCTACCCCGA TAGTGATGCT AGCGTAGACT TTGGCGAAAT TACCGCGGCA
TTAAGTTGGA AGTGGTTCTC GGTAAGTTAC TCTCAGATAG TCAATGCCGA CAGTGATGTG
GCTTCAGATC CGCTGGATGA AAAAGATCTC TCCTATATCC AGGCTGGTTT TTCATTCCCT
TTCTCAGACA CATTAAGCTT AGATCTCCAT TACGGATATT CATCCGGTGA TGTGAGCACC
GCATGGTTCG ATGTCGATAG CTACGCCGAT TATTCTTTAT CTCTAAATAA AGACACCGAT
ATCGGAACTG TCTCATTTAT GGTGAGTGAT ACCGATCTGG AGCAAGACGA TCCTAAAGTG
ATTTTGGGAT ACAGCTATAG CTTCGACCTA TAG
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| Protein sequence | MKQALRTTSI LASGLLMTFC ANASVTANIG ASSNYLWRGV TQTQDAVAVQ GGIDYEHDSG
VYLGTWASNV DFGDDTSYEI DFYAGYAGSI GEDFGYDIGY LYYAYPDSDA SVDFGEITAA
LSWKWFSVSY SQIVNADSDV ASDPLDEKDL SYIQAGFSFP FSDTLSLDLH YGYSSGDVST
AWFDVDSYAD YSLSLNKDTD IGTVSFMVSD TDLEQDDPKV ILGYSYSFDL
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