| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0596 |
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| Symbol | |
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| ID | 5610155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 727532 |
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| End bp | 729097 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640931441 |
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| Product | sugar (pentulose and hexulose) kinase |
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| Protein accession | YP_001472336 |
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| Protein GI | 157373736 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.354732 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAATG AAAAAGATAA CGGCTACCTA CTGGCTATCG ATAATGGCAC TCAGAGTGTC
CGGGCACTTA TCTTCGATCT ACAGGGACAA TTGGTTGCCA AATCTCAGGT GAAGCTCATT
CCCTATGTGT CACCTCAGTC TGGTTGGTGT GAGCAAAGTG GCGAGTATTA CTGGGATAAG
TTGTGTCAGG CCTGCCAATC ACTCTGGGCT CAAGGGATCG ATAAGACAAG AATCAAAGGG
ATGTCTGTGA CCACACAGCG CGGCACTATG TTGCCCTTGG ACTGCGAAGG TAACCCATTG
CATGACGCCA TATTATGGCT CGATCAGCGT AAAGCCGAAC CGGAGAAAAA TCTGGGAGGG
ATCTGGGACC CGCTGTTTAA GGTGATGGGA CTTAGCGAAA CCATCAATAC GTTTCGCAGC
CGGGCACAGC CTAACTGGCT CTATCAGGCC AGGCGAGATC TATGGGATAA AACCTATAAA
TTTACCTTCC TGTCGGGCTT TTTTCACCAC AGATTGACCG GCGAGTGGGT CGACTCATCG
GGCTCGCAGG TGGGCTACCT TCCATTCGAT TACAGGAAAC ACAGGTGGGC AAAGAAGTGG
GATTGGAAGT GGCGAGCGCT GAATGTGAGA GAGGATCAAC TATTGCCCTT GGTCGATCCC
GGCGATCGGA TCGGTGAGAT CACGGCTCAG GCGAGTGCAT TGACCGGGAT CCCCGAAGGC
TTGCCGGTGA TCGCTGCCGC AGCAGACAAG GCATGTGAGG TCTTAGGCTC CGGCGGTCAA
CACTCAGATG TGGGCTGCCT GAGCTTCGGC ACTACTGCAA CCATCAATGT CACCATGAAA
CGTTACGTTG AGGCGGTGCG CTTTCTCCCC CCCTATCCGT CGGCCATTGC CGGTTCCTAC
TGTAGTGAAG TGATGCTGTA TCGAGGCTTC TGGATGGTGA GCTGGTTTAA GGAGCAGTTT
GCTCATATCG AGAAGGCAAA AGCGGATGAG GCGGGGATAG AGGCGGAAGC GCTATTCGAT
GAGTTGGTGA ATACCGTACC TCCCGGCTCC ATGGGCTTAA TGCTTCAGCC CTATTGGGGC
CCGGGTGTTA AGCAACCCGG CCCTGAAGCG AAAGGCGCCG TGATAGGCTT TGGAGATATT
CATACCCGCG CTCACCTGTA TCGGGCGATA TTGGAGGGGC TGGCCTTCGG TCTTAAAGAG
GGGCTGGAAG CCATCGAAAA GCGCAGTGGC TGCAAGATAA AAGAGCTTAG GGTATCCGGT
GGTGGGGCGC AGAGTGATGC GGCCATGCAG ATCGCCGCCG ATGTATTCGG CTTAACCACG
GTCAGGGCTC ACACGGTAGA AACTTCGGGA CTGGGCGCCG CCATCGATGC TGCGGTCGGA
CTGGGCTTAC ATCCGGATTT CGACAGCGCA ATTAAGGCCA TGGTGCATCA GGGGAAACGG
TTCGAGCCCG ATGCAGAGCA TTATAAGATG TATCAGCGAC TCTATGGCGA GGTCTATCTC
AATATCTATA AGAAGCTGCA ACCGCTGTAT TCTAAGATCA GGGATATAAC GGGCTACCCT
GAATAG
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| Protein sequence | MMNEKDNGYL LAIDNGTQSV RALIFDLQGQ LVAKSQVKLI PYVSPQSGWC EQSGEYYWDK
LCQACQSLWA QGIDKTRIKG MSVTTQRGTM LPLDCEGNPL HDAILWLDQR KAEPEKNLGG
IWDPLFKVMG LSETINTFRS RAQPNWLYQA RRDLWDKTYK FTFLSGFFHH RLTGEWVDSS
GSQVGYLPFD YRKHRWAKKW DWKWRALNVR EDQLLPLVDP GDRIGEITAQ ASALTGIPEG
LPVIAAAADK ACEVLGSGGQ HSDVGCLSFG TTATINVTMK RYVEAVRFLP PYPSAIAGSY
CSEVMLYRGF WMVSWFKEQF AHIEKAKADE AGIEAEALFD ELVNTVPPGS MGLMLQPYWG
PGVKQPGPEA KGAVIGFGDI HTRAHLYRAI LEGLAFGLKE GLEAIEKRSG CKIKELRVSG
GGAQSDAAMQ IAADVFGLTT VRAHTVETSG LGAAIDAAVG LGLHPDFDSA IKAMVHQGKR
FEPDAEHYKM YQRLYGEVYL NIYKKLQPLY SKIRDITGYP E
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