| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0594 |
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| Symbol | |
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| ID | 5610336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 724186 |
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| End bp | 725883 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640931439 |
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| Product | FAD linked oxidase domain-containing protein |
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| Protein accession | YP_001472334 |
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| Protein GI | 157373734 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.227015 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCGG AACGGCGAAA TATGAACAGA TCACAGCAAG ATAATCGAAA CTGGAATGGT
TGGGGCGCCA GAGAGAAACG GATGGAGCTT TCACAAGATG GTGCAGCTTT TATCTGTGAA
AAACTGGGCC AGGCCAAGCC ATTGGGAGTA TCGACACTGG CGCGGGTGAT TGCCAAGGTT
CCCGATTCCA GACTTGCCGA TAGCGAGCTA TATTCGACCG ACGCAGAGAT CAGGCTACGC
CACGCCCGGG GGCAGAGCCT ACCCGATTGG CTGGCAATGA AGAGTGGCGA GTTTGGCGTC
TTTCCCGATG CCGTCGCGTT TCCTGTATCC GGTGAAGATA TTCGCATCTT GATGGCGGAG
GCTAAAGCGA ATGGCTGGCA GCTTATTCCC TATGGGGGTG GCACATCTGT AGTGGGCCAT
ATTACGCCAT GTCCGTCAGA TAAACCCGTT ATCACCGTCT CTCTGACTAA GATGAATCGG
CTCCTCGAGC TGGACAGGGT CGATCAGATT GCCACCTTCG GCGCCGGGGT AAAGGGGCCT
TTCCTCGAGG CTCAACTTCA GGCACATGGC TATACTCTGG GCCATTTTCC TCAATCTTTC
GAGCTCTCTA CATTGGGCGG CTGGGTGGTA ACGCGCTCCA GTGGACAGCA ATCATTGGGT
TATGGTCGTA TCGAAAACCT GTTTGCAGGT GGAGAGATAG AAACCTTTAA TGGCACGGTG
GATATCCCAA CCTTGCCTGC ATCATCGGCG GGACCGGACT GGCGCCAGTT GGTACTGGGA
TCGGAAGGGC ACTTGGGGAT CTTGACTCAG GCTAAGGTGA GGGTCACCCG TGTCGCCGAA
GAGGAATTTT TTGGTGTCGC CTTCATGCCT GACTGGCAGA GTGGGATCGA CTGCGCCAGG
GAGATCATTC AGCAAAAGCT TCCCCTCTCT ATGCTGCGGG TCAGCAACAG TGAAGAGACC
CATACCCAGC TATTTCTTTC GGCGACAGAG ACTCAGCGCA GCTGGTTGAA TCGTCTGCTT
TCACTCAAGG GAGTAGGTGA AGGGAAATGT ATGCTGGTCT ATGGCGTCAC GGGAGACCTG
GATGCCAACA GGCAAAGCTA TAAGCGACTC AAGCAGGTTT TACGTCGCTT CAAAGGGGTT
AATACCGGGC AGCGCCTGGG CAAGAAGTGG GCCCATAAAC GATTTACCTT CCCCTACCTG
AGAGAAACGC TGTGGCAGAT GGGCTATGCG ATCGATACTT TAGAGACGGC GACAAACTGG
TCGAATATCG AATCAATGAC GCAAAAGATA GAGCACAGTC TGCGAGATGG GTTAACTGAG
TTTGATTCCA AGGTACATGT ATTCTCGCAT CTGTCTCATC TCTATGGTGA TGGTGCCAGT
ATCTATACCA CATACCTCTT TCCTGTCGCG GATAGCTATG ATGAAACCTA TCGTCGCTGG
CAGAAACTAA AATCTACGAC ATCGACCTTG ATCGTGGAAA ATAATGGCAC CATTAGCCAT
CAGCATGGCG TCGGCAGTGA TCATGCCCCG TATCTAGCCA GGGAAAAAGG TGAGCATGTG
ATGGCATCCC TGCAGACCTG TTTCGACTAC TTCGATCCGG ACAAACAGTT AAATCCGGGT
AAGCTGTTTA AGGCGGGGCA GACAGAACCT GTAGAGACTG TTCACACTGA GAAAAGTCAC
ACAGAGAAAG AGCAATGA
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| Protein sequence | MQPERRNMNR SQQDNRNWNG WGAREKRMEL SQDGAAFICE KLGQAKPLGV STLARVIAKV
PDSRLADSEL YSTDAEIRLR HARGQSLPDW LAMKSGEFGV FPDAVAFPVS GEDIRILMAE
AKANGWQLIP YGGGTSVVGH ITPCPSDKPV ITVSLTKMNR LLELDRVDQI ATFGAGVKGP
FLEAQLQAHG YTLGHFPQSF ELSTLGGWVV TRSSGQQSLG YGRIENLFAG GEIETFNGTV
DIPTLPASSA GPDWRQLVLG SEGHLGILTQ AKVRVTRVAE EEFFGVAFMP DWQSGIDCAR
EIIQQKLPLS MLRVSNSEET HTQLFLSATE TQRSWLNRLL SLKGVGEGKC MLVYGVTGDL
DANRQSYKRL KQVLRRFKGV NTGQRLGKKW AHKRFTFPYL RETLWQMGYA IDTLETATNW
SNIESMTQKI EHSLRDGLTE FDSKVHVFSH LSHLYGDGAS IYTTYLFPVA DSYDETYRRW
QKLKSTTSTL IVENNGTISH QHGVGSDHAP YLAREKGEHV MASLQTCFDY FDPDKQLNPG
KLFKAGQTEP VETVHTEKSH TEKEQ
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