| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0589 |
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| Symbol | |
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| ID | 5609782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 718427 |
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| End bp | 719533 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640931434 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472329 |
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| Protein GI | 157373729 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00223156 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000261848 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCCGAAC CTGCACAGAG CCAAGATGGT GGAGTCGAAA AGCTTCAGGG CGAGGTATGG
CAAGGTACCC GTGATGGTAA ACCCGGCGAA GGTAGCCTGT TTTATCGATT GGAGTTTAAC
GCAGATAATA ATGTTGAGGT TACCAAGCAG TCGGGTGGCT TTAACAAGAC AGAGACTCAG
AAGTGGAGCC TCAATGGTGA CTCGGTATTA ATTGAGAGTC TCAACGGTGA TGAAATCACC
GACTTCGATG GCGCATCCTT GGCGTTTGTC GATAGTGAGG AGATACGTTT CTCCCTCGAC
GGTGACGGCT TCAATATTCA TAAGTGGTAC AAGTATCGTG CATTTGCACA CGTCCTGTTT
GTACTTATCG GTTTGATGGC ACTGAACGAG CTTTGTCGCC GCCTCAAGTG GAGTAACTAT
GTCTTATGGT TCGCTCTGCC GATTGTATTG ATTCCACTGT GGTCAAGCTA TGAGATCACT
TACTGGTTCA AATGGGTCAA GCTCTACTCG GTTGTCGGCG CGGCGGCACT GTTTACGCTG
ATCCGTTTTA CCAAGGTTGG AGATATGAAG TGGGCCAAGT TTGGTGCCGG AGCCTTCCTT
GCAATCAACA TCTCAGAAGC GGTAATGCAA GACTTTAGCA TGGGCAACCT AGCTAACGTT
CTTAACGCTA TCGGTGGTGT GCTCTCAATT ATCACTCTGG CAGGCTGGGC AATGATCCAT
GCCGATAAGA GTAAGCAGCA AGATATGATC TGGCCTGCGA TGACCACCTT CTGGATTATC
GCCTATGACG TCTGGAACAT CGTATTTGTC TACCTGAACT TCCCGGGCTC AGCTACCGCT
CAGATGATGG TATTGATCGC GGCGACCCTA CCTTCACTCT TTATTAAGAA AGGAACCTGG
CTACAGGCGC GTGCATTCAC CTTAGCGGGT TCATTCATGT ACTACTTCAG TTGTCCGTTT
ATGTACGAGA GCAACGTAGT GCCTATGCCA CGTAACGATG AGCTGATGTT GGCGGCCGGT
GCAGCCAGTT TCATCATCAA CGGCATCTAT GCCTACGTCT TCTTCAGTAA GAAATTCAGA
CAGCGTCAGG CGGTAGCCAG CGCATAA
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| Protein sequence | MAEPAQSQDG GVEKLQGEVW QGTRDGKPGE GSLFYRLEFN ADNNVEVTKQ SGGFNKTETQ
KWSLNGDSVL IESLNGDEIT DFDGASLAFV DSEEIRFSLD GDGFNIHKWY KYRAFAHVLF
VLIGLMALNE LCRRLKWSNY VLWFALPIVL IPLWSSYEIT YWFKWVKLYS VVGAAALFTL
IRFTKVGDMK WAKFGAGAFL AINISEAVMQ DFSMGNLANV LNAIGGVLSI ITLAGWAMIH
ADKSKQQDMI WPAMTTFWII AYDVWNIVFV YLNFPGSATA QMMVLIAATL PSLFIKKGTW
LQARAFTLAG SFMYYFSCPF MYESNVVPMP RNDELMLAAG AASFIINGIY AYVFFSKKFR
QRQAVASA
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