| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0588 |
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| Symbol | |
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| ID | 5610130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 717378 |
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| End bp | 718286 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931433 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472328 |
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| Protein GI | 157373728 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000146469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000240806 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGACATTC CTGTCTGGCA ATATGTCGTT TCGATGACTG GATATATTGT GTTTTTGCTC
GTTTTGGTGG AAGGCATGCG CCGTGCACCA AGAATGACAG CCGCATTTTG GCTGCTGTCC
CTTTTAACTG CGCCTCTATG GGCAGACAAC CTTGATGGAT GGTTCCGTTG GGTTAAGACG
GTCAGCGTTC TTATCCCCAC AGCTATTGTC GTAGGTGGTG CCAGAATTGC CTGGCTATAC
CATGATAACC CAAACAAATT CCTCGCGTTT TTCCGCGGTG ACTGGGTGTT GAAAGTGCTC
TACATGGTAC TTTTCCTCAA TATTGCTGAA GCGACGGCTA AAGATTTCGC CACCGCCAAC
TACTTCAACG CTATCTGTGG TGTCATCTTA TGTATCACTA TTCCGTTCCC ACGTTATAAG
AATGGTAAGC GTCTGTACTG GGTGATAGGC CGTGATAAGC CAAATGACCT GCTGTTCTAT
TCAACTGCGG CATGGAACTT CCTCTATACC ACATGGAACC TGGCATTCGT ATTCGGTGAA
AACCCAGGCT TCTTCGCCAG CTCATTCTGT ATCTTGATGG CTGCCGAGTT GTACCCAATC
ATCAAGGGAC GCCCAGAGCT TTATATCATA GCTCGAGTTT ACACTCTGGC ATTCCACATT
CTTGTTCGGG CAAACGGCGA CATCTTCACT CCGGTTATGG ACTCTTCGAG TTGGGCCAGC
GATAGCGTGG TCTACTACTG GGGGGCGATT AACCTGGCTA TGCATATTCC GTTCGTTATC
TGGTACTTCA AGACTAAGAA CAAGAGTGAA ACCAACGAAC CTCCATTTGG AGAGAAGTCT
CCACCACCGC TCATCTCAGA TTATTCAGAC ACTAAGGTGA ATGACGAGAG CAAGCTAACT
ACAGCCTGA
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| Protein sequence | MDIPVWQYVV SMTGYIVFLL VLVEGMRRAP RMTAAFWLLS LLTAPLWADN LDGWFRWVKT
VSVLIPTAIV VGGARIAWLY HDNPNKFLAF FRGDWVLKVL YMVLFLNIAE ATAKDFATAN
YFNAICGVIL CITIPFPRYK NGKRLYWVIG RDKPNDLLFY STAAWNFLYT TWNLAFVFGE
NPGFFASSFC ILMAAELYPI IKGRPELYII ARVYTLAFHI LVRANGDIFT PVMDSSSWAS
DSVVYYWGAI NLAMHIPFVI WYFKTKNKSE TNEPPFGEKS PPPLISDYSD TKVNDESKLT
TA
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