| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0586 |
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| Symbol | |
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| ID | 5610128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 714968 |
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| End bp | 715951 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640931431 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001472326 |
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| Protein GI | 157373726 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.737047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000179773 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACAACA AAGGCTCCTC GAATGAATTA GCCATCGACG CCAGGGGACT CACTAAACAT
TTCGGCTCGT TAGCGGCAGT CTCCGACATG AACCTTAGCG TCGAGAAGGG GCATATCTAT
GGATTTCTGG GCCCAAACGG CTGTGGAAAA TCCACCAGTA TCCGCATGCT GACCGGACTA
CTCACTCCCA CGGCGGGAAG TATTGAGGTG CTGGGTATGT CTATCCCTAA ACAGGCCGAG
GCCCTAAGAC TGCGTATCGG ATATATGACG CAGAAATTTT CTCTCTATGA CGACCTGACC
GTCAAAGAGA ACCTAGAGTT TATCGCTCAA ATCTATTGCT TAACCCCCAA TGAGAGTAAA
CGAAAAATAG GCGAACTGCT CAGCACCTAT AAACTGATAA AGCAGGCGAA ACAGTATGCC
GGAACCCTTA GCGGTGGTCA GAAGCAGCGT CTCTCCCTCG CCTGTTCATG CCTTAACGAT
CCCGAACTCC TCTTTCTCGA TGAGCCCACA TCGGCAGTGG ATCCTCAAAA CAGACGAGAC
TTTTGGGAGC AGCTGTTCGA CCTCTCTGAG AGTGGCACCA GTATTCTGGT CACCACCCAC
TACATGGATG AAGCCGAGCG ATGCCATGGG CTCGCCATCA TGGAGCAAGG GTATATTCGC
GCCGATGGCA GCCCCAACGA GCTGATGCGG CAGATGGGCG CCCATGTTAT CGAAGTCTCA
CACCCTAACC TGAGACAGCT CAAATCGGAG CTGATGCTCA ATAGAGAGAT CAAATCGGCG
GCCCAACTGG GAGCGCGCTT AAGGGTCTTG GTAGACAACA AGATCTCAGA TCCTCTGGGC
TGGCTCAGAC AGATCCGGCC CGAACTGGCC CTGAACGAAA TAAGAGAGGT TCCGCCAAAT
CTGGAAGATG TATTTGTCAC CGTCACAGGT CAGGACAGAG ACAGAGATAG CACCCGTGAG
CCTCAAACGT CGGAGGCTAA TTGA
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| Protein sequence | MNNKGSSNEL AIDARGLTKH FGSLAAVSDM NLSVEKGHIY GFLGPNGCGK STSIRMLTGL
LTPTAGSIEV LGMSIPKQAE ALRLRIGYMT QKFSLYDDLT VKENLEFIAQ IYCLTPNESK
RKIGELLSTY KLIKQAKQYA GTLSGGQKQR LSLACSCLND PELLFLDEPT SAVDPQNRRD
FWEQLFDLSE SGTSILVTTH YMDEAERCHG LAIMEQGYIR ADGSPNELMR QMGAHVIEVS
HPNLRQLKSE LMLNREIKSA AQLGARLRVL VDNKISDPLG WLRQIRPELA LNEIREVPPN
LEDVFVTVTG QDRDRDSTRE PQTSEAN
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