Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0582 |
Symbol | |
ID | 5609965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 709771 |
End bp | 710268 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640931427 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_001472322 |
Protein GI | 157373722 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1246] N-acetylglutamate synthase and related acetyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0137231 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTTAA TCAGGAAGGC GGTTGAGGGT GATGCTCAGG CTATTTATGA CCTCAGGAGT CGGGCTATCC TCGAAGAGTG CGCAGGATTC TATAGTGCAG AGCAACTATC ACTATGGACG AAGGGTGGCG TGTCAGAAAG TTTAATGACC GATATCGTAA ACTCATTTTA TGTTTCAGAG ATCGATGGGC AAGTAATAGG AAGTGGCAAG CTAACGATTG AAACCGGCAT GCTAGATGCT ATTTTCGTTG AACCTGAGTT TTTCGGTAGA GGGGCTGCCA GGTTAATGGT TTCCTTTCTT GAAAACCTGG CTTTAGAGAG TGGTCTTAGT TCAATAAAAC TTGAGTCCAC GCTCAATGCT GCTCCATTCT ATCGCCGATG CGGATTTGTA GGTGATGAGA TCTCCACTTA CCACTCACCG AGAGGCATAA GCTTAGATTG TGTTCCAATG CTAAAGTCAC TGGAAAAGAG AGAGCAAGGT GATGCAAGTC AGCAATGA
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Protein sequence | MILIRKAVEG DAQAIYDLRS RAILEECAGF YSAEQLSLWT KGGVSESLMT DIVNSFYVSE IDGQVIGSGK LTIETGMLDA IFVEPEFFGR GAARLMVSFL ENLALESGLS SIKLESTLNA APFYRRCGFV GDEISTYHSP RGISLDCVPM LKSLEKREQG DASQQ
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