| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0577 |
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| Symbol | |
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| ID | 5609974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 703016 |
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| End bp | 704257 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640931422 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001472317 |
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| Protein GI | 157373717 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.152415 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGCCA GTATTAAGGC ATTGCCGGAG CAGGTCAGAC AATACCTTAT CGTGACCGGT
AACTATTGGG TGTTTACCCT CACCGATGGT GCGCTGCGTA TGCTGGTGGT GCTGCACTTT
CATCAGCTCG GCTACACGCC ACTTGCGATC GCCATGTTGT TTATCTTCTA TGAGATCTTC
GGTGTGGTCA CCAACTTAGT CGGTGGCTAT CTGGGGGCGC GGCTCGGGCT TAACCGCACC
ATGAACTTAG GCCTTGGCTT GCAAGTGCTC GCCCTGGGTA TGCTCCTGTT GCCCACCTCT
ATGCTGACCA TAGCTTGGGT CATGGCCGCG CAAGGGCTTT CAGGCATAGC TAAAGACCTC
AATAAGATGA GCGCCAAGAG TTCGATCAAA TTGCTGGTCA CTTCTGAGCA ATACGGCAAG
GGAGAGCAGG AGAAGCTCTA TAAATGGGTG GCACTCCTCA CCGGCTCTAA GAATGCCCTC
AAAGGGGCGG GCTTCTTCTT AGGTGGCGCA CTGCTGTCTC TATTCGGTTT CACCGCAGCC
ATTGGGGTAT TGGCCGGCAT GTTAGTCATG GTCTGGCTCT TTAGCATGGT GAAACTTAAG
AAAGATCTGG GCAAAGCCAA GCGAAAGCCT AAGTTCAGTG AGATCTTCTC CAAGAGTCGC
AGCATCAACA TCTTATCTGC CGCAAGACTG TTTCTGTTTG CGGCCAGAGA CGTCTGGTTT
GTGGTGGCCT TGCCGGTATA TTTGGCGAGT CAATTTGGTT GGGATCACTA TTACGTGGGC
GGCTTCCTGG CGCTCTGGGT GATCGGCTAT GGTTGTGTGC AGAGCATTGC CCCGAGTCTG
ACCGGTAAGC GACGGGGAAA GATCCCCGAT GGTTGCTCGG CGTTGGTCTG GGTCATGCTG
CTCACCTTCA TTCCTGGGTT AATCGCCCTG GCATTGAGTC ATGACATCGC GCCTCAGATA
AGCTTGCTGC TGGGTTTGAT CCTATTCGGC GGTGTGTTTG CGATTAACTC ATCCCTGCAC
AGTTACCTTA TCGTCAGCTA TGCCAGTGAC GATGGCGTGT CGCTCGATGT AGGTTTCTAC
TACATGGCCA ACGCCATGGG TCGTTTGATA GGCACCATAC TTTCCGGTTG GGTCTATCAA
GTCGCCGGGC TCGAGGCCTG TTTGTGGATC TCATCGGCCT TCCTGGTCAT GACTGTGGTG
ATTAGTGTTT ATTTACCCCA AAGGGTGGCG GCCTTGGAAT GA
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| Protein sequence | MLASIKALPE QVRQYLIVTG NYWVFTLTDG ALRMLVVLHF HQLGYTPLAI AMLFIFYEIF
GVVTNLVGGY LGARLGLNRT MNLGLGLQVL ALGMLLLPTS MLTIAWVMAA QGLSGIAKDL
NKMSAKSSIK LLVTSEQYGK GEQEKLYKWV ALLTGSKNAL KGAGFFLGGA LLSLFGFTAA
IGVLAGMLVM VWLFSMVKLK KDLGKAKRKP KFSEIFSKSR SINILSAARL FLFAARDVWF
VVALPVYLAS QFGWDHYYVG GFLALWVIGY GCVQSIAPSL TGKRRGKIPD GCSALVWVML
LTFIPGLIAL ALSHDIAPQI SLLLGLILFG GVFAINSSLH SYLIVSYASD DGVSLDVGFY
YMANAMGRLI GTILSGWVYQ VAGLEACLWI SSAFLVMTVV ISVYLPQRVA ALE
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