| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0574 |
|---|
| Symbol | |
|---|
| ID | 5609613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sediminis HAW-EB3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009831 |
|---|
| Strand | + |
|---|
| Start bp | 700340 |
|---|
| End bp | 700684 |
|---|
| Gene Length | 345 bp |
|---|
| Protein Length | 114 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640931419 |
|---|
| Product | ArsR family transcriptional regulator |
|---|
| Protein accession | YP_001472314 |
|---|
| Protein GI | 157373714 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0640] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.191131 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCAT TAGATCTATT TAAAGCCCTG AGTGATGAAA CCCGTTTGCG CAGCCTGCTC
CTGATCCAGG CTGAGCAGGA GCTCTGCGTC TGTGAGTTAA TGCAGGCGCT GGAAGAGAGT
CAGCCAAAAG TGTCCAGGCA CTTGGCTCAA CTAAGAAAGT TTGGCCTGCT TACCGACAGG
CGTCAGGGAC AATGGGTCTT CTATCGATTG AATCCTTCGC TGCCCAAGTG GGCGAATGCC
GTGATAGATG AAACCTGCTC GGCCAATCGA GCCTTGATCC AGGATGAGCT GACCCGCTTG
AACAAGATGG GTGACAGACC CGATCGTGTT AAGAGTTGCT GCTAG
|
|---|
| Protein sequence | MTALDLFKAL SDETRLRSLL LIQAEQELCV CELMQALEES QPKVSRHLAQ LRKFGLLTDR
RQGQWVFYRL NPSLPKWANA VIDETCSANR ALIQDELTRL NKMGDRPDRV KSCC
|
|---|
| |