| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0572 |
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| Symbol | |
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| ID | 5609611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 698124 |
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| End bp | 699464 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640931417 |
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| Product | peptidase U62, modulator of DNA gyrase |
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| Protein accession | YP_001472312 |
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| Protein GI | 157373712 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.37217 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTACAC CTAGCACTGA CATTGAATTA AATTCATTAA AAGACGCCGT ATCTATGGCC
CTTGAGTATG CAAAAGAACT GGGGACAACG GCTGCAGAAG TTGCCATCAG TAAACAACAA
GGCTTATCGG TTTCTACCCG ACTGAAAGAG GTCGAAACGG TTGAGTTTAA TAAAGATGGT
GCGCTAGGTA TTACCCTGTT CCGTGATGGT TGCAAGGGAA GTTCATCCAC TTCCGATCTG
AGCCCGGATG CCATTAGACA AGCGGTGAAA GCTGCCGACG ATATTGCCAA ATTTACCTCA
TCCGATCCCT ATAACGGTTT AGCCGATGCG GACCTGATGG CGACCGAGTT TCCGGATCTG
GATCTATTCC ATCCCCAGGA GATCTCAGCC GATGAGCTGA CCGATTTAGC GGCGCGCTCC
GAAGAGGCGG CCTTGAGTGT CGATAGCCGG ATAACTAACT CAGACGGTGC CAGTGCCAAT
GCACATACCG GCCTGAAAGT TTATGGTAAT AGTCATGGTT TCCTTCATGG TTACTCGAGC
TCCCGCTACA GCCTGAGCTG TGTGGTTATC GGTGAAACCG ATGGCAACAT GCAACGTGAT
TATGACTATA CGATCTCGAG AAAATTCGGG GATCTGTTAT CGCCTGAAGA GGTAGGAAGA
AAAGCCTCTG AGAAGACCTT GAGCCGTTTA GGTAGCAGAA AAATTGCGAC GACTGAGTTG
CCTGTATTGT TGTCACCGGA AATTGCGACC GGCTTAATCA GTCACCTGGT CGGTGCGATT
AGTGGTAGCA GCTTATATAG AAAGTCGAGC TTCCTACTCG ACTCTATCGA TACTCAGTTG
TTCCCTGACT GGTTCAGTAT CGAAGAGCAA CCTCATCTGA AAGGGGCATT AGCGAGTGCC
AATTACGATA GCGAAGGTGT GGCTACTCAA GAGAGACATA TTATCGAGAG CGGTATTTTG
TCTACCTACC TGTTAACCAG TTACTCGGCC CGAAAATTGG GGCTTAAAAA TACCGGTCAT
GCCGGCGGCA TCTACAACTG GACCCTGTCT CATACAGGCC AGACGTTCGA TGAACTAGTC
AAAGAGATGG GCACCGGCCT GATTGTGACT GAGGTGATGG GCCAAGGTGT TAATGCGGTT
ACGGGTGATT ACTCTCGCGG CGCTGCAGGT TTCTACGTTG AAAACGGTGT GATTCTCTAT
CCTGTCGAGG AGATAACCAT AGCGGGCAAC CTGAAAGATA TGTACCAAAA TATTGTTGCG
GTGAGTAAAG ATCGCGATCT GCGCTCATCG ATACGTACCG GTGGTATCTT ACTCAGCGAT
ATGAAGATCG CGGGTAATTA A
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| Protein sequence | MTTPSTDIEL NSLKDAVSMA LEYAKELGTT AAEVAISKQQ GLSVSTRLKE VETVEFNKDG
ALGITLFRDG CKGSSSTSDL SPDAIRQAVK AADDIAKFTS SDPYNGLADA DLMATEFPDL
DLFHPQEISA DELTDLAARS EEAALSVDSR ITNSDGASAN AHTGLKVYGN SHGFLHGYSS
SRYSLSCVVI GETDGNMQRD YDYTISRKFG DLLSPEEVGR KASEKTLSRL GSRKIATTEL
PVLLSPEIAT GLISHLVGAI SGSSLYRKSS FLLDSIDTQL FPDWFSIEEQ PHLKGALASA
NYDSEGVATQ ERHIIESGIL STYLLTSYSA RKLGLKNTGH AGGIYNWTLS HTGQTFDELV
KEMGTGLIVT EVMGQGVNAV TGDYSRGAAG FYVENGVILY PVEEITIAGN LKDMYQNIVA
VSKDRDLRSS IRTGGILLSD MKIAGN
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