| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0571 |
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| Symbol | |
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| ID | 5609817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 697353 |
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| End bp | 697892 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640931416 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472311 |
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| Protein GI | 157373711 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3028] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.310055 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAG TCGGTGATTC AGAACACTTT AAACAGCCCT TTGACCATGA TGAAGAATAT
GTCAGCAGAG CTGAAGCAAA ACGTGAAATA GCGGTTTACC AAGAGCTTGG TATCAAGCTA
GTTGCATTAA GTAAAAGCCA AATTAAGAAG TTAAATTTAG ACGAGCTTTT ATTTGATAAT
GTAATGAAAA CTAAGACGAT TAAAATCAAT ACCGAAGCCT ATCGTCGTCA GTTGCAGTTT
ATTGGCAAGA TCATGCGTAA TGTCGATATT GAAGCATTAC AGCTCGATAT TAAGAATGTG
CTGAATCAGA ACAGTAACGA AAGCGCGAAG CAAAATGTTG CCGAGAAGCT GAAAGAACAG
TTGCTAAGTG AAGGCGATGC TGCCGTTCAA GATCTGCTCG AGAAGCACCC TCAACTGGAA
AGACAGAAGT TACGTCAACT TATCCGTCAG TCAATTAAAG AGCTGGCTAA GAAACCCGAC
GAGGCTTCAA AATCTTCAAT CGAATTGGTC AAATACTTAC GAAATGAGAT ATCTGAATAA
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| Protein sequence | MKIVGDSEHF KQPFDHDEEY VSRAEAKREI AVYQELGIKL VALSKSQIKK LNLDELLFDN
VMKTKTIKIN TEAYRRQLQF IGKIMRNVDI EALQLDIKNV LNQNSNESAK QNVAEKLKEQ
LLSEGDAAVQ DLLEKHPQLE RQKLRQLIRQ SIKELAKKPD EASKSSIELV KYLRNEISE
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