| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0560 |
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| Symbol | |
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| ID | 5614083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 680300 |
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| End bp | 680788 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640931405 |
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| Product | rod shape-determining protein MreD |
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| Protein accession | YP_001472300 |
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| Protein GI | 157373700 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2891] Cell shape-determining protein |
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| TIGRFAM ID | [TIGR03426] rod shape-determining protein MreD |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.227811 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.273117 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTATGC ATATTGCTAA TGGACGCTGG GTGGTATGGT TGAGTTTCCT GGTCGCCATG
TTATTTCAGA TAATGCCTCT GCCGGATCTT GTCGAGCCGT GGCGCCCGGA CTGGTTACTG
CTGGTTATCA TCTATTGGGC CATGGCGTTG CCCCACCGAT ATAATATTTT ATCGGCCTGG
GTCTTAGGCG TGCTGCTCGA CATCATGCTT GGGGCACATC TGGGTATTCG AGCGTTATCG
ATCTCTCTGG TCGTCTATGT GGTGGTGCTG CATTTTCAGC GGTTACGTAA CTTCCCCATG
TGGCAGCAGG CACTGATGAT CTCCAGTTTG ATATGCTTAT ATCACCTGGT CATCTTCTGG
GTTCAATTTG TCGTTGATAC GGCCACATTT GATGTGCGCC TATTTTTACC CGCCATCTCC
AGCCTCATTA TCTGGCCTTG GGTATTTTGG ATCTTACGTC GTGTCAGGCG TTTATATAAG
GTGAGATAA
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| Protein sequence | MSMHIANGRW VVWLSFLVAM LFQIMPLPDL VEPWRPDWLL LVIIYWAMAL PHRYNILSAW
VLGVLLDIML GAHLGIRALS ISLVVYVVVL HFQRLRNFPM WQQALMISSL ICLYHLVIFW
VQFVVDTATF DVRLFLPAIS SLIIWPWVFW ILRRVRRLYK VR
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