| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0559 |
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| Symbol | |
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| ID | 5614082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 679407 |
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| End bp | 680303 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640931404 |
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| Product | rod shape-determining protein MreC |
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| Protein accession | YP_001472299 |
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| Protein GI | 157373699 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1792] Cell shape-determining protein |
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| TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0551516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.419374 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCCA TTTTTGCACG TGGTATTTCA AACCAATTCA GGCTGACACT AGCAATTATT
TTGTCGGTGA TCCTCATCGT GGCTAACAAC CGACTCGACC CCGTTCGTAA ATCTGTCTCA
TCTGTTCTAA GTCCTCTTCA ATACGTTGCT AATGTTCCCG GTGCACTCTT AGACTGGTCG
GCCGAGAGTC TCGCGACTCG AAATATGCTG ACAAAGCAGA ACAAGGAGCT ATTGAGGCAG
CAACTTCTGA TGAGCGAGCG ACTACAGCGC TTCGAACACC TCAGGCAGGA AAATGACCGG
TTACGTGCAC TACTGGGCTC TCCCGTGCAT ATGGACTCGA AGAAGGTCGT TGCCGAGGTG
ATGGAAGTTG CCAGCGATCC CTATCATCAA TATGTGGTAC TAAATCATGG TGCCATGAGC
GGCGTGTTTG TCGGCCAGCC TGTGGTCGAT GCCCAAGGCG TAGTAGGGCA GGTGGTGCAG
GTCAATGAGC TAACCAGCAG GGTACTTCTG ATCTCCGATG CAACCCATGG TATCCCGGTA
AGAGTCACGC GTAACGACGT GCGTCTGGTC GTTAAAGGCA CGGGAGTGCT CGATGAACTC
GAGCTCAGTT ATGTGTCTAA GAGTACAGAT ATCAGGGTCG GCGATCTCTT GGTCTCCTCG
GGTTTGGGAA ACCGTTTTCC CGAAGGTTAT CCCGTTGCCC GTGTGATGAG CGTGGTCAAA
GATGACGGGC AAAGCTATGC CAATGTGATC GCCCAGCCGT TAGCCGCGCT CGATAGAATT
CGTTACCTTT TGCTGATCTG GCCCGATGAG CAGGATGAAA GTTTGAGTAA AGATGAGCTT
TTGAACATTG AAAATACCTC AGAATCTACA AAGCAAACCG CTGAGGTGAG CCAATGA
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| Protein sequence | MKPIFARGIS NQFRLTLAII LSVILIVANN RLDPVRKSVS SVLSPLQYVA NVPGALLDWS
AESLATRNML TKQNKELLRQ QLLMSERLQR FEHLRQENDR LRALLGSPVH MDSKKVVAEV
MEVASDPYHQ YVVLNHGAMS GVFVGQPVVD AQGVVGQVVQ VNELTSRVLL ISDATHGIPV
RVTRNDVRLV VKGTGVLDEL ELSYVSKSTD IRVGDLLVSS GLGNRFPEGY PVARVMSVVK
DDGQSYANVI AQPLAALDRI RYLLLIWPDE QDESLSKDEL LNIENTSEST KQTAEVSQ
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