| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0537 |
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| Symbol | |
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| ID | 5613681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 656060 |
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| End bp | 656920 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640931382 |
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| Product | nuclease |
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| Protein accession | YP_001472277 |
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| Protein GI | 157373677 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACAT TTCAATTGCC GTCTTCCTCA ATGCTACTGA CTAATCTTTT TTTTCTGACC
CTTGCCCTCA CTATTCTACC GACGACTCAA GCTGCGCAAG CAAAGATAAC TCAACAAGAG
GGCCAAGTGC TAAATGACGG GGTGACGTCC GCCTTATGTG CTCCCACGCA TTATGATGAG
CAGGTTGAGC TTAAATACGT TAATGATGGC GATACCATCA CCCTGAAAGA TGGGCGTCTG
GTACGGCTGA TTGGTGTCGA TTCGCCGGAG CTCGATTTTA AATCACCTGA ACTGTCAGAA
CCATACGCAA AAGAAGCGCG ACATTTTTTA CAGAAAGAGC TCAAACCTGG TCAGATATTA
AACTTGTCCT TCGATCAAAA GAGGCTGGAT CCCTATGGTC GTACTTTGGC CTATGTTTAT
ACTGAAAACG GCGAGCATCT TCAGGAGCTT CTATTAAGCC AAGGTTTCGC TAAGACTCGT
GTTTATCAGA ATGATTATTT TTGGCAGTGT TTAAACCAAG TCGAGTTAAC TGCCAGAGAT
AAGGAACTGG GGTTATGGTC ACATCCAGAC TATCGCGCCA AAACGGTTGA CGAGTTAGGC
AGGAGCGACC GTAATCGATG GGGTGAGGTC AAAGGGGTCG TTACCGGATA TGAAAGAAAA
GGCCAGTATT TGTGGCTCAT TTTAGATGAA AAGTTCTATG TTGGTATACC TAGAGCCGAA
TCTGGTAAAT TTAGCAACAT TTTGAACCTT AACCTGCTTG AAAGCCCAGT AATTGTCCGT
GGTTCGTTGT ATTATTCCTA CAAAAAGTGG CAGTTGATCA GTAGTCATCC CTCGCAGATA
AGTTTGCAAA ATAGACCTTA G
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| Protein sequence | MNTFQLPSSS MLLTNLFFLT LALTILPTTQ AAQAKITQQE GQVLNDGVTS ALCAPTHYDE
QVELKYVNDG DTITLKDGRL VRLIGVDSPE LDFKSPELSE PYAKEARHFL QKELKPGQIL
NLSFDQKRLD PYGRTLAYVY TENGEHLQEL LLSQGFAKTR VYQNDYFWQC LNQVELTARD
KELGLWSHPD YRAKTVDELG RSDRNRWGEV KGVVTGYERK GQYLWLILDE KFYVGIPRAE
SGKFSNILNL NLLESPVIVR GSLYYSYKKW QLISSHPSQI SLQNRP
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